| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 314159 |
| Family | GH1 |
| Protein Properties | Length: 486 Molecular Weight: 54897.9 Isoelectric Point: 6.7194 |
| Chromosome | Chromosome/Scaffold: 1 Start: 23125236 End: 23127846 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 31 | 472 | 0 |
| RSDFPEGFAFGAGISAYQWEGAVKEDGRKPSVWDTFLHSRKMDNGDIACDGYHKYKEDVQLMAETGLHAFRFSISWSRLISNGKGSINPKGLQFYKNFIQ ELVKHGIEPHVTLHHYDHPQYLEDDYGGWINRKIIEDFTAYADVCFREFGNHVKFWTTINEANIFSIGGYNDGNSPPGRCSFPGRSCLLGNSSTETYIVG HNLLLAHASVSRLYKQKYKDIQGGSIGFSLFSMYFTPSTSSKDDKIATQRANDFYLGWMLEPLIYGDYPDVMRKTIGSRLPVFSEEESEQVKGSSDFIGV IHYVTASVKNIDINPSLSGIPDFNSDMGQSINSILEYIKQSYGNPPVYILENGKTMTQDLDLQQKDTPRIEYLDAYIGAVLKAVRNGSDTRGYFVWSFMD LYELLDGYKSTFGLYSVNFSDPHLKRSPKLSAHWYSGFLKGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 486 Download |
| MEEFLSSITM FMLLLLASSR FGKCSSDVYS RSDFPEGFAF GAGISAYQWE GAVKEDGRKP 60 SVWDTFLHSR KMDNGDIACD GYHKYKEDVQ LMAETGLHAF RFSISWSRLI SNGKGSINPK 120 GLQFYKNFIQ ELVKHGIEPH VTLHHYDHPQ YLEDDYGGWI NRKIIEDFTA YADVCFREFG 180 NHVKFWTTIN EANIFSIGGY NDGNSPPGRC SFPGRSCLLG NSSTETYIVG HNLLLAHASV 240 SRLYKQKYKD IQGGSIGFSL FSMYFTPSTS SKDDKIATQR ANDFYLGWML EPLIYGDYPD 300 VMRKTIGSRL PVFSEEESEQ VKGSSDFIGV IHYVTASVKN IDINPSLSGI PDFNSDMGQS 360 INSILEYIKQ SYGNPPVYIL ENGKTMTQDL DLQQKDTPRI EYLDAYIGAV LKAVRNGSDT 420 RGYFVWSFMD LYELLDGYKS TFGLYSVNFS DPHLKRSPKL SAHWYSGFLK GKKHLSCFPR 480 HNAIA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 2.0e-134 | 35 | 465 | 445 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-156 | 34 | 473 | 465 | + Glycosyl hydrolase family 1. | ||
| PLN02849 | PLN02849 | 0 | 1 | 485 | 500 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 0 | 5 | 471 | 490 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 0 | 3 | 474 | 496 | + beta-glucosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD14488.1 | 0 | 1 | 472 | 1 | 508 | AAD14488 Similar to gi |
| EMBL | CAA18113.1 | 0 | 1 | 471 | 1 | 445 | glucosidase like protein [Arabidopsis thaliana] |
| RefSeq | NP_176217.2 | 0 | 1 | 472 | 1 | 492 | BGLU4 (BETA GLUCOSIDASE 4); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_193941.2 | 0 | 1 | 471 | 1 | 484 | BGLU3 (BETA GLUCOSIDASE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_973974.1 | 0 | 1 | 472 | 1 | 467 | BGLU1 (BETA GLUCOSIDASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 30 | 470 | 13 | 487 | A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain |
| PDB | 3gnp_A | 0 | 30 | 470 | 13 | 487 | A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain |
| PDB | 3gno_A | 0 | 30 | 470 | 13 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ptq_B | 0 | 30 | 469 | 30 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ptq_A | 0 | 30 | 469 | 30 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
