Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 314697 |
Family | CE8 |
Protein Properties | Length: 586 Molecular Weight: 64113 Isoelectric Point: 8.6545 |
Chromosome | Chromosome/Scaffold: 1 Start: 28826631 End: 28828566 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 279 | 570 | 0 |
DVTVASDGSGDVLTVNEAVARVPKKSLKMFVIYVKSGTYKENVVMDKSKWNVMIYGDGKGKTIISGGKNFVDGTPTYETATFAIQGKGFIMKDIGIINTA GATKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLPNQFNTITAQGKKDPNQNSGMSIQRCTIS ANGNVIAPTYLGRPWKDFSTTVIMETEIGPVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTKRVKWAGYKSVMSDAEAAKFTVATLLH |
Full Sequence |
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Protein Sequence Length: 586 Download |
MDSVNSFKGY GKVNEAEDLA LKKKTRKRLL LLSISVVVLV AVIIAAVVAT VVHKKNNEST 60 PSSPPELTPS TSLKAICSVT RFPESCISSI SKLPSSNTSD PETLFKLSLK VIIDELDSIS 120 DLPEKLSKET EDERIKSALR VCGDLIEDAL DRLNDTVSAI DDEGKKKTLS SSKIEDLKTW 180 LSATVTDHDT CFDTLDELKQ NKTEYANSTI TQNLKSAMSR STEFTSNSLA IVSKILAALS 240 DLGIPIHRRR RLMSHHQQSV DFKEWARRRL LQTESLKPDV TVASDGSGDV LTVNEAVARV 300 PKKSLKMFVI YVKSGTYKEN VVMDKSKWNV MIYGDGKGKT IISGGKNFVD GTPTYETATF 360 AIQGKGFIMK DIGIINTAGA TKHQAVAFRS GSDFSVYYQC SFDGFQDTLY PHSNRQFYRD 420 CDVTGTIDFI FGSAAVVFQG CKIMPRQPLP NQFNTITAQG KKDPNQNSGM SIQRCTISAN 480 GNVIAPTYLG RPWKDFSTTV IMETEIGPVV RPSGWMSWVS GVDPPASIVY GEYKNTGPGS 540 DVTKRVKWAG YKSVMSDAEA AKFTVATLLH GGDWIPATGV THQLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 8.0e-150 | 104 | 583 | 490 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 1.0e-151 | 138 | 580 | 470 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-180 | 279 | 571 | 298 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 585 | 589 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 583 | 582 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 585 | 1 | 586 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_175787.1 | 0 | 1 | 585 | 1 | 586 | ATPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002265217.1 | 0 | 1 | 585 | 1 | 577 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 583 | 1 | 585 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 581 | 1 | 584 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 279 | 582 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 272 | 578 | 1 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 6e-18 | 292 | 576 | 20 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 6e-18 | 292 | 576 | 20 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 6e-18 | 292 | 576 | 20 | 339 | A Chain A, Pectin Methylesterase From Carrot |