Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 316691 |
Family | GH17 |
Protein Properties | Length: 333 Molecular Weight: 35988.8 Isoelectric Point: 4.1915 |
Chromosome | Chromosome/Scaffold: 2 Start: 17816429 End: 17817769 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 20 | 329 | 0 |
GVCYGRNGNNLPTPADTVALYKTNNIDAIRMYEPFADMLEALRGSGLSVAFGPRNEEIQSLAQDPAAATNFVATWITPYQNDVAIKWITIGNEVFPGEIA PFVAAAIRNVNAALTNSGVTGIAVTTVLAMNALTNSYPPSAATFLPDLTEIMTEISSILSQTNSPLMTNIYPYFAYASDPYHISLDYASFKSDTPVVIDG DLKYTNMFEAMVDGFNAALEKINAGNVVVMVAESGWPTEGNPPYTSVDNAKAYNLGIRTCGGSQRKRTPRRPETPVDVFLFAMFRENQKDGPVEQSFGIF APDMTPVYDL |
Full Sequence |
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Protein Sequence Length: 333 Download |
MILLSIQIFC PAGVAGDITG VCYGRNGNNL PTPADTVALY KTNNIDAIRM YEPFADMLEA 60 LRGSGLSVAF GPRNEEIQSL AQDPAAATNF VATWITPYQN DVAIKWITIG NEVFPGEIAP 120 FVAAAIRNVN AALTNSGVTG IAVTTVLAMN ALTNSYPPSA ATFLPDLTEI MTEISSILSQ 180 TNSPLMTNIY PYFAYASDPY HISLDYASFK SDTPVVIDGD LKYTNMFEAM VDGFNAALEK 240 INAGNVVVMV AESGWPTEGN PPYTSVDNAK AYNLGIRTCG GSQRKRTPRR PETPVDVFLF 300 AMFRENQKDG PVEQSFGIFA PDMTPVYDLF CY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 48 | 322 | 294 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-97 | 20 | 331 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05912.1 | 0 | 20 | 331 | 29 | 318 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ABN05913.1 | 0 | 2 | 331 | 15 | 337 | Glycoside hydrolase, family 17 [Medicago truncatula] |
RefSeq | NP_177901.1 | 0 | 1 | 330 | 7 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_177902.1 | 0 | 1 | 331 | 12 | 343 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002306606.1 | 0 | 20 | 330 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 20 | 329 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 20 | 329 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 20 | 329 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 20 | 329 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 20 | 329 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |