y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 316754 |
Family | CBM43 |
Protein Properties | Length: 133 Molecular Weight: 14916.3 Isoelectric Point: 8.1907 |
Chromosome | Chromosome/Scaffold: 2 Start: 18252853 End: 18253490 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 32 | 109 | 7.9e-27 |
WCVAKPSSDQATLLDNINFACSHVDCRVLSSGCPCYSPGNLINHASIAMNLYYQANGRNYWNCNFKNSGLIVITNPSE |
Full Sequence |
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Protein Sequence Length: 133 Download |
MAKAWICLSF LIILYLFSDK NFINVNAETK TWCVAKPSSD QATLLDNINF ACSHVDCRVL 60 SSGCPCYSPG NLINHASIAM NLYYQANGRN YWNCNFKNSG LIVITNPSEF ALSLQLCYLK 120 TLLYIYKSIS LY* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-16 | 31 | 100 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-29 | 31 | 108 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-18 | 31 | 108 | 12 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |