PlantCAZyme

Basic Information
Species	Ricinus communis
Cazyme ID	31686.m000027
Family	GH3
Protein Properties	Length: 342 Molecular Weight: 36830.7 Isoelectric Point: 5.4917
Chromosome	Chromosome/Scaffold: 31686 Start: 26 End: 1052
Description
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH3	3	127	3.7e-37
GSDSEGVACCVKHFPGHGDTHVDSHRDLPTVDKPLPELERFEFAPFRTAAPHAPAVMTAHIVYPALDPDNPATMSRAILHDLLRTQWNYDGVIITDGMDM HAIAHRYDAGEAAVNALMAGADMVM

Full Sequence
Protein Sequence Length: 342 Download
MAGSDSEGVA CCVKHFPGHG DTHVDSHRDL PTVDKPLPEL ERFEFAPFRT AAPHAPAVMT 60 AHIVYPALDP DNPATMSRAI LHDLLRTQWN YDGVIITDGM DMHAIAHRYD AGEAAVNALM 120 AGADMVMAIG SRETQAATID AIAAAIDDGR LPLAEVLARL DRLDRLAHTH PAGAVQYTTE 180 DADRALMADA WRRALTARGN PQRPAPGSKV RLVARQDVVS DGVSEAGVPA TAIAAMLSAL 240 FDVDLVTFAD AETFDWNALP DDGRFTILAS TSRRRYGPHA RATWTPHLHL ALWNPYQALD 300 FAAPALMTYG FAPPALDAVR AWLAGEIEAV GRCPVPGFLR TP

Full Sequence

Protein Sequence Length: 342 Download

MAGSDSEGVA CCVKHFPGHG DTHVDSHRDL PTVDKPLPEL ERFEFAPFRT AAPHAPAVMT    60
AHIVYPALDP DNPATMSRAI LHDLLRTQWN YDGVIITDGM DMHAIAHRYD AGEAAVNALM    120
AGADMVMAIG SRETQAATID AIAAAIDDGR LPLAEVLARL DRLDRLAHTH PAGAVQYTTE    180
DADRALMADA WRRALTARGN PQRPAPGSKV RLVARQDVVS DGVSEAGVPA TAIAAMLSAL    240
FDVDLVTFAD AETFDWNALP DDGRFTILAS TSRRRYGPHA RATWTPHLHL ALWNPYQALD    300
FAAPALMTYG FAPPALDAVR AWLAGEIEAV GRCPVPGFLR TP 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PRK15098	PRK15098	3.0e-8	4	128	131	+ beta-D-glucoside glucohydrolase; Provisional
PRK05337	PRK05337	6.0e-23	1	127	128	+ beta-hexosaminidase; Provisional
pfam00933	Glyco_hydro_3	1.0e-27	6	127	124	+ Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	9.0e-36	3	128	128	+ Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]

Gene Ontology
GO Term	Description
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	ACF93787.1	0	1	336	168	506	HexI [Collimonas fungivorans]
RefSeq	NP_899929.1	0	1	335	159	496	glycosy hydrolase family protein [Chromobacterium violaceum ATCC 12472]
RefSeq	XP_002535972.1	0	1	342	1	342	conserved hypothetical protein [Ricinus communis]
RefSeq	YP_002785665.1	0	1	334	143	473	putative Glycosyl hydrolase, family 3 N terminal domain; putative Beta-N-acetylhexosaminidase [Deinococcus deserti VCD115]
RefSeq	YP_604547.1	0	1	334	143	473	Beta-N-acetylhexosaminidase [Deinococcus geothermalis DSM 11300]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	3tev_B	0	1	154	165	318	A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1
PDB	3tev_A	0	1	154	165	318	A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1
PDB	3nvd_B	3e-27	1	311	208	583	A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1
PDB	3nvd_A	3e-27	1	311	208	583	A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1
PDB	3bmx_B	3e-27	1	311	208	583	A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis

EST Download unfiltered results here

Hit	Length	Start	End	EValue
HO414128	154	10	156	5e-17
FC387567	160	3	156	3e-16
GW451682	121	8	127	0.000000000000003
FC326247	180	3	176	0.000000000000004
GR350831	91	1	83	0.000000000005

Orthologous Group
Species	ID
Physcomitrella patens	Pp1s44_194V6.1	Pp1s8830_1V6.1
Picea abies	MA_158781g0150

CAZyme Information