| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 31686.m000027 |
| Family | GH3 |
| Protein Properties | Length: 342 Molecular Weight: 36830.7 Isoelectric Point: 5.4917 |
| Chromosome | Chromosome/Scaffold: 31686 Start: 26 End: 1052 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 3 | 127 | 3.7e-37 |
| GSDSEGVACCVKHFPGHGDTHVDSHRDLPTVDKPLPELERFEFAPFRTAAPHAPAVMTAHIVYPALDPDNPATMSRAILHDLLRTQWNYDGVIITDGMDM HAIAHRYDAGEAAVNALMAGADMVM | |||
| Full Sequence |
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| Protein Sequence Length: 342 Download |
| MAGSDSEGVA CCVKHFPGHG DTHVDSHRDL PTVDKPLPEL ERFEFAPFRT AAPHAPAVMT 60 AHIVYPALDP DNPATMSRAI LHDLLRTQWN YDGVIITDGM DMHAIAHRYD AGEAAVNALM 120 AGADMVMAIG SRETQAATID AIAAAIDDGR LPLAEVLARL DRLDRLAHTH PAGAVQYTTE 180 DADRALMADA WRRALTARGN PQRPAPGSKV RLVARQDVVS DGVSEAGVPA TAIAAMLSAL 240 FDVDLVTFAD AETFDWNALP DDGRFTILAS TSRRRYGPHA RATWTPHLHL ALWNPYQALD 300 FAAPALMTYG FAPPALDAVR AWLAGEIEAV GRCPVPGFLR TP 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 3.0e-8 | 4 | 128 | 131 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PRK05337 | PRK05337 | 6.0e-23 | 1 | 127 | 128 | + beta-hexosaminidase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-27 | 6 | 127 | 124 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 9.0e-36 | 3 | 128 | 128 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF93787.1 | 0 | 1 | 336 | 168 | 506 | HexI [Collimonas fungivorans] |
| RefSeq | NP_899929.1 | 0 | 1 | 335 | 159 | 496 | glycosy hydrolase family protein [Chromobacterium violaceum ATCC 12472] |
| RefSeq | XP_002535972.1 | 0 | 1 | 342 | 1 | 342 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_002785665.1 | 0 | 1 | 334 | 143 | 473 | putative Glycosyl hydrolase, family 3 N terminal domain; putative Beta-N-acetylhexosaminidase [Deinococcus deserti VCD115] |
| RefSeq | YP_604547.1 | 0 | 1 | 334 | 143 | 473 | Beta-N-acetylhexosaminidase [Deinococcus geothermalis DSM 11300] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3tev_B | 0 | 1 | 154 | 165 | 318 | A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1 |
| PDB | 3tev_A | 0 | 1 | 154 | 165 | 318 | A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1 |
| PDB | 3nvd_B | 3e-27 | 1 | 311 | 208 | 583 | A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1 |
| PDB | 3nvd_A | 3e-27 | 1 | 311 | 208 | 583 | A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1 |
| PDB | 3bmx_B | 3e-27 | 1 | 311 | 208 | 583 | A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO414128 | 154 | 10 | 156 | 5e-17 |
| FC387567 | 160 | 3 | 156 | 3e-16 |
| GW451682 | 121 | 8 | 127 | 0.000000000000003 |
| FC326247 | 180 | 3 | 176 | 0.000000000000004 |
| GR350831 | 91 | 1 | 83 | 0.000000000005 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s44_194V6.1 | Pp1s8830_1V6.1 | |||
| Picea abies | MA_158781g0150 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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