Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 317250 |
Family | GT14 |
Protein Properties | Length: 379 Molecular Weight: 43838.1 Isoelectric Point: 10.2701 |
Chromosome | Chromosome/Scaffold: 3 Start: 1178731 End: 1180895 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 54 | 308 | 0 |
FAYLISASKGDAGKLKRLLQSLYHRRNHYLIHLDLEAPEEEHLEMARFVAGEPLFQPEGNVMIVGKPNLVTYRGPTMLATTLHAMALLLRCCRWDWFINL SASDYPLVTQDDLIYAFSELPRDLNFIQHTSRLGWKMNKRGKPIIIDPGLYSLNKSEIWWVSNQRSLPTSFKLFTGSAWTFLSRPFSEYCIIGYDNLPRT LLLYYTNFVSSPEGYFQTLICNSDEFKSTTVNHDLHYIAWDNPPKQHPKILGTRD |
Full Sequence |
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Protein Sequence Length: 379 Download |
MAIKKLLMIS FCLTSLLFSL LYIIPTTKTL FTSSKIPTLP LESNQNHNST LPCFAYLISA 60 SKGDAGKLKR LLQSLYHRRN HYLIHLDLEA PEEEHLEMAR FVAGEPLFQP EGNVMIVGKP 120 NLVTYRGPTM LATTLHAMAL LLRCCRWDWF INLSASDYPL VTQDDLIYAF SELPRDLNFI 180 QHTSRLGWKM NKRGKPIIID PGLYSLNKSE IWWVSNQRSL PTSFKLFTGS AWTFLSRPFS 240 EYCIIGYDNL PRTLLLYYTN FVSSPEGYFQ TLICNSDEFK STTVNHDLHY IAWDNPPKQH 300 PKILGTRDYR KMVMSNRPFA RKFKSNDPVL NRIDREILRR TRKRGSKPDL GPGPGARRLK 360 SLLMRLLLRR NFVNRQCR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 8.0e-72 | 54 | 313 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-155 | 47 | 378 | 349 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK32748.1 | 0 | 1 | 378 | 1 | 378 | AF361580_1 AT3g03690/T12J13_3 [Arabidopsis thaliana] |
GenBank | AAX33323.1 | 0 | 5 | 378 | 4 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
RefSeq | NP_187019.1 | 0 | 1 | 378 | 1 | 378 | UNE7 (unfertilized embryo sac 7); acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002270685.1 | 0 | 25 | 378 | 32 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319193.1 | 0 | 5 | 378 | 4 | 363 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00002 | 68 | 340 | 99 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00002 | 68 | 340 | 99 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00002 | 68 | 340 | 99 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00002 | 68 | 340 | 99 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00005 | 68 | 340 | 99 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |