Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 318218 |
Family | CE8 |
Protein Properties | Length: 589 Molecular Weight: 64280.8 Isoelectric Point: 8.1748 |
Chromosome | Chromosome/Scaffold: 3 Start: 5968484 End: 5970465 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 281 | 573 | 0 |
NVTVAAYGSGDVRTVNEAVERIPKNGTTMFVIYVKAGTYVENVLLDKSKWNVFIYGDGKDKTIISGSKNYVDGTSTFKTATFATQGKGFMMKDIGIINTA GPEKHQAVAFRSGSDLSVYYQCSFDGFQDTLYPHSNRQFYRNCDVTGTVDFIFGAATVVFQGCNIRPRQPLPNQFNTITAEGKKDKHQNSGTSIQRCTIS ANGNVTAPTYLGRPWKEFSTTVIMQSVIGSIVNPVGWIAWNSTLDPPPSTILYGEYKNSGPGSDVTQRVEWAGYKPIMSDDEAGRFTVATFLR |
Full Sequence |
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Protein Sequence Length: 589 Download |
MDTVKSINKG YGKVDEAEDL ALKRKTRKRL FLIGVSVVVL VSILISSVVA VAVHSRKNNS 60 PNPTPSSVNE LTPAASLRTV CSVTRYPASC ISSISKLPSS NTTDPEVLFR LSLQVVVDEL 120 NSIADLPKKL AEETDDERIK SALGVCGDLF DEAIDRVNET VSAMEVGDGK KILNSKTIDD 180 LQTWLSAAVT DHDTCIDALD ELSQNKTEYA NSTISLKLKS AMVNSTEFTS NSLAIVAKIL 240 STLSDFGISI HRRRLLNSNS FPNWVNPGVR RLLQAKNLTP NVTVAAYGSG DVRTVNEAVE 300 RIPKNGTTMF VIYVKAGTYV ENVLLDKSKW NVFIYGDGKD KTIISGSKNY VDGTSTFKTA 360 TFATQGKGFM MKDIGIINTA GPEKHQAVAF RSGSDLSVYY QCSFDGFQDT LYPHSNRQFY 420 RNCDVTGTVD FIFGAATVVF QGCNIRPRQP LPNQFNTITA EGKKDKHQNS GTSIQRCTIS 480 ANGNVTAPTY LGRPWKEFST TVIMQSVIGS IVNPVGWIAW NSTLDPPPST ILYGEYKNSG 540 PGSDVTQRVE WAGYKPIMSD DEAGRFTVAT FLRGADWLPV MGVPYQQT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-150 | 134 | 587 | 461 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 9.0e-153 | 105 | 585 | 493 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 6.0e-180 | 281 | 574 | 299 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 588 | 592 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 9 | 586 | 586 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 586 | 1 | 584 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_175787.1 | 0 | 1 | 586 | 1 | 584 | ATPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188047.1 | 0 | 1 | 308 | 1 | 297 | ATPMEPCRC; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188047.1 | 0 | 38 | 239 | 228 | 434 | ATPMEPCRC; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188047.1 | 0 | 56 | 584 | 446 | 966 | ATPMEPCRC; pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 274 | 585 | 1 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 278 | 585 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.0000000000001 | 293 | 581 | 19 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.0000000000001 | 293 | 581 | 19 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.0000000000001 | 293 | 581 | 19 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |