y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 320010 |
Family | CE8 |
Protein Properties | Length: 353 Molecular Weight: 39218.5 Isoelectric Point: 9.262 |
Chromosome | Chromosome/Scaffold: 4 Start: 402872 End: 404751 |
Description | pectinesterase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 53 | 328 | 0 |
RVDQSGKGDFSKIQEAIESIPPNLNNSQLYYIWVKPGIYREKVVIPADKPYITLSGTQASNTFLIWSDGGDILESPTLTIFATDFVCRFLTIQNKLGTAG RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPTKGSITAQMRTSATEKSGFIFLGCKLTGSSSTYLG RPWGPYSRVIFAYSFFSNVVAPRGWNQWGDSTKENTVYYGEYKCYGPGADRGQRVKWSKQLSDDEATVFLSKDFIG |
Full Sequence |
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Protein Sequence Length: 353 Download |
MGLYKTKSKR SIANYYHIIL INIFILSSIT FSSMASSNSS SSSIDFSTAI LIRVDQSGKG 60 DFSKIQEAIE SIPPNLNNSQ LYYIWVKPGI YREKVVIPAD KPYITLSGTQ ASNTFLIWSD 120 GGDILESPTL TIFATDFVCR FLTIQNKLGT AGRAVALRVA ADKAAFYGCV ITSYQDTLLD 180 DNGNHYFKNC YIEGATDFIC GSASSLYERC HLHSLSPTKG SITAQMRTSA TEKSGFIFLG 240 CKLTGSSSTY LGRPWGPYSR VIFAYSFFSN VVAPRGWNQW GDSTKENTVY YGEYKCYGPG 300 ADRGQRVKWS KQLSDDEATV FLSKDFIGGK DWLRPAPSHF KKWSQINPKI YK* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 9.0e-79 | 52 | 335 | 301 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-84 | 51 | 338 | 301 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 2.0e-86 | 52 | 337 | 299 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-102 | 52 | 335 | 301 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-180 | 50 | 334 | 285 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 52 | 334 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 54 | 334 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 8e-18 | 49 | 337 | 6 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-18 | 49 | 337 | 6 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 9e-18 | 49 | 337 | 6 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |