y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 320434 |
Family | CE8 |
Protein Properties | Length: 620 Molecular Weight: 68572.7 Isoelectric Point: 9.3707 |
Chromosome | Chromosome/Scaffold: 4 Start: 6612365 End: 6614538 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 307 | 602 | 0 |
ATVAKDGSGNFTTINDALRAMPEKYEGRYIIYVKQGIYDESVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAG PEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAA NEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVINKEEALNFTVGPFLQG |
Full Sequence |
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Protein Sequence Length: 620 Download |
MAFQDFDKIQ ERVNANRKRK FRKRIIVGTV SLLVVVAAIV GGAFAYVAYE KRNEQQQAKS 60 HNKSGSGNNV KDSDKKSQSP PSQSPSSKSP PSTSQKAPVS AAQSAKPGQG DKIIQTICGS 120 TLYKRACEET LKNRTEKGFA LANPTSFLKS AIEAVNEDLD RVLEKVLSLK TENQDDRDAI 180 AQCKLLVEDA KEETAASLNK INGTEVNSFA KVVPDLESWL SAVMSYQETC LDGFEEGTLK 240 SEVKKSVNSS QVLTSNSLAM ITSFDVNLSP VMKVATRHLL DDIPSWVSNE DRRMLRAVDV 300 KALKPNATVA KDGSGNFTTI NDALRAMPEK YEGRYIIYVK QGIYDESVTV DKKKANLTMV 360 GDGSQKTIVT GNKSHAKKIR TFLTATFVAQ GEGFMAQSMG FRNTAGPEGH QAVAIRVQSD 420 RSIFLNCRFE GYQDTLYAYT HRQYYRSCVI VGTIDFIFGD AAAIFQNCNI FIRKGLPGQK 480 NTVTAQGRVD KFQTTGFVVH NCKIAANEDL KPVKEEYKSY LGRPWKNYSR TIIMESKIEN 540 VIDPVGWLRW QETDFAIDTL YYAEYNNKGS SGDTTSRVKW PGFKVINKEE ALNFTVGPFL 600 QGDWISASGS PVKLGLYDA* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 3.0e-150 | 141 | 617 | 497 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 3.0e-150 | 2 | 616 | 637 | + pectinesterase | ||
PLN02468 | PLN02468 | 6.0e-157 | 106 | 616 | 522 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 1 | 617 | 631 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 306 | 603 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 303 | 616 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 306 | 618 | 4 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-22 | 306 | 604 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-22 | 306 | 604 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-22 | 306 | 604 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |