| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 322756 |
| Family | GH5 |
| Protein Properties | Length: 510 Molecular Weight: 56570.4 Isoelectric Point: 6.6429 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2676579 End: 2680542 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 12 | 324 | 2.90069e-43 |
| IIDEKGQRVKLACVNWPSHLQPVVAEGLSKQGVDDLAKKIVAMGFNCVRLTWPLDLATNETLANNVTVRQSFQSLGLNDDISGFETKNPSMIDLPLIEAY KKVVAKLGNKNVMVILDNHVTKPGWCCGYNDGNGFFGDTFFDPATWISGLIKIATTFKGASNVVGMSLRNELRGPKQNVDDWFKYMQQGAEAVHEANPNV LVILSGLSYDTDLSFVRSRPVNLTFSRKLVFELHRYSFTNTKTWSSKNPNEACGEILQSIENGGGFNLRDFPVFLSEFGIDLRGKNVNDNRYIGCILGWA AENDVDWSIWTLQ | |||
| Full Sequence |
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| Protein Sequence Length: 510 Download |
| MAYPLSTNSR WIIDEKGQRV KLACVNWPSH LQPVVAEGLS KQGVDDLAKK IVAMGFNCVR 60 LTWPLDLATN ETLANNVTVR QSFQSLGLND DISGFETKNP SMIDLPLIEA YKKVVAKLGN 120 KNVMVILDNH VTKPGWCCGY NDGNGFFGDT FFDPATWISG LIKIATTFKG ASNVVGMSLR 180 NELRGPKQNV DDWFKYMQQG AEAVHEANPN VLVILSGLSY DTDLSFVRSR PVNLTFSRKL 240 VFELHRYSFT NTKTWSSKNP NEACGEILQS IENGGGFNLR DFPVFLSEFG IDLRGKNVND 300 NRYIGCILGW AAENDVDWSI WTLQGSYYLR EGVVGMSEYY GILDSDWVRV RSQNFLQRLS 360 LIQSPLQGPG SQSKVYNLVF HPLTGLCMLQ SILDPTKVTL GLCNESQPWS YTPENTLLTL 420 KDKSLCLETT GPNAPVKLSE ASCSSPNLSK WETISASNML LAAKSTNNSL CLDVDESNNL 480 IASNCKCVKG EDSSCDPISQ WFKIVKVRK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00652 | Ricin_B_lectin | 3.0e-5 | 383 | 485 | 111 | + Ricin-type beta-trefoil lectin domain. | ||
| smart00458 | RICIN | 2.0e-5 | 380 | 485 | 112 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| pfam00150 | Cellulase | 4.0e-11 | 45 | 323 | 287 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 1 | 509 | 1 | 507 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | NP_172772.2 | 0 | 1 | 509 | 31 | 537 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_189245.1 | 0 | 1 | 509 | 1 | 508 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002285424.1 | 0 | 1 | 505 | 25 | 526 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312657.1 | 0 | 2 | 505 | 9 | 509 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 2e-19 | 7 | 350 | 8 | 339 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 2e-19 | 7 | 350 | 8 | 339 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 3e-19 | 7 | 350 | 8 | 339 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 3e-19 | 7 | 350 | 8 | 339 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 2zun_C | 0.00000002 | 20 | 359 | 61 | 408 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CK119337 | 212 | 250 | 461 | 0 |
| DK465433 | 281 | 112 | 391 | 0 |
| DY282456 | 271 | 1 | 271 | 0 |
| FC879052 | 259 | 1 | 259 | 0 |
| DY905374 | 288 | 37 | 323 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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