| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 323006 |
| Family | GT35 |
| Protein Properties | Length: 950 Molecular Weight: 107186 Isoelectric Point: 5.3871 |
| Chromosome | Chromosome/Scaffold: 5 Start: 5711064 End: 5715794 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT35 | 179 | 944 | 0 |
| ALKRLGFDLESVVSQEPDPALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEAAEDWLELSNPWEIVRNDVSYPIKFYGKVVFGS DGKKRWIGGEDIVAVAYDVPIPGYKTKTTINLRLWSTKAPSEDFDLSSYNSGKHTEAAEALFNAEKICFVLYPGDESNEGKALRLKQQYTLCSASLQDIC QLGRIPEKVAVQMNDTHPTLCIPELMRILMDLKGLSWEDAWKITQRTVAYTNHTVLPEALEKWSLELMEKLLPRHVEIIEKIDEELVRTIVSEYGTADPD LLEEKLKAMRILENVELPSAFADVIVKPENKPVTAKDAQNGVKTEQEEEKIAGEEEEEEVIPEPIKPPKMVRMANLAVVGGHAVNGVAEIHSEIVKQDVF NDFVQLWPEKFQNKTNGVTPRRWIRFCNPYLSDIITNWIGTEDWVLNTEKLAELRKFADNEDLQSEWRAAKKKNKLKVVALIKERTGYTVSPDAMFDIQI KRIHEYKRQLLNILGIVYRYKKMKEMSASEREKAYVPRVCIFGGKAFATYVQAKRIVKFITDVASTINHDPEIGDLLKVIFVPDYNVSVAELLIPASELS QHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIREEVGEENFFLFGAKADEIVNFRKERAEGKFVPDPTFEGVKKFVRSGVFGSNSYDELIGSLEGN EGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTRMSILNTAGSFKFSSDRTIHEYAKDIWNIK | |||
| Full Sequence |
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| Protein Sequence Length: 950 Download |
| MDTMRISGVS TGAEILVQCN SLSSLVSRRC DDGRLRTRMF PARSRNWRPS PTRRSSLSVK 60 SVSSEPKAKV TDAVLDSEQE VFSSMNPFAP DAASVASSIK YHAEFTPLFS PEKFELPKAF 120 FATAQSVRDA LIMNWNATYE YYNRVNVKQA YYLSMEFLQG RALSNAVGNL GLNSTYGDAL 180 KRLGFDLESV VSQEPDPALG NGGLGRLASC FLDSMATLNY PAWGYGLRYK YGLFKQRITK 240 DGQEEAAEDW LELSNPWEIV RNDVSYPIKF YGKVVFGSDG KKRWIGGEDI VAVAYDVPIP 300 GYKTKTTINL RLWSTKAPSE DFDLSSYNSG KHTEAAEALF NAEKICFVLY PGDESNEGKA 360 LRLKQQYTLC SASLQDICQL GRIPEKVAVQ MNDTHPTLCI PELMRILMDL KGLSWEDAWK 420 ITQRTVAYTN HTVLPEALEK WSLELMEKLL PRHVEIIEKI DEELVRTIVS EYGTADPDLL 480 EEKLKAMRIL ENVELPSAFA DVIVKPENKP VTAKDAQNGV KTEQEEEKIA GEEEEEEVIP 540 EPIKPPKMVR MANLAVVGGH AVNGVAEIHS EIVKQDVFND FVQLWPEKFQ NKTNGVTPRR 600 WIRFCNPYLS DIITNWIGTE DWVLNTEKLA ELRKFADNED LQSEWRAAKK KNKLKVVALI 660 KERTGYTVSP DAMFDIQIKR IHEYKRQLLN ILGIVYRYKK MKEMSASERE KAYVPRVCIF 720 GGKAFATYVQ AKRIVKFITD VASTINHDPE IGDLLKVIFV PDYNVSVAEL LIPASELSQH 780 ISTAGMEASG TSNMKFSMNG CVLIGTLDGA NVEIREEVGE ENFFLFGAKA DEIVNFRKER 840 AEGKFVPDPT FEGVKKFVRS GVFGSNSYDE LIGSLEGNEG FGRADYFLVG KDFPSYIECQ 900 EKVDEAYRDQ KRWTRMSILN TAGSFKFSSD RTIHEYAKDI WNIKQVELP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 96 | 943 | 865 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam00343 | Phosphorylase | 0 | 179 | 944 | 779 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| PRK14986 | PRK14986 | 0 | 122 | 948 | 843 | + glycogen phosphorylase; Provisional | ||
| PRK14985 | PRK14985 | 0 | 152 | 944 | 816 | + maltodextrin phosphorylase; Provisional | ||
| COG0058 | GlgP | 0 | 110 | 944 | 844 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11757.1 | 0 | 55 | 949 | 2 | 935 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
| RefSeq | NP_189578.1 | 0 | 1 | 949 | 1 | 962 | glucan phosphorylase, putative [Arabidopsis thaliana] |
| Swiss-Prot | P53536 | 0 | 3 | 948 | 5 | 1002 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
| RefSeq | XP_002305367.1 | 0 | 46 | 949 | 2 | 949 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526085.1 | 0 | 7 | 949 | 3 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1z8d_A | 0 | 102 | 944 | 35 | 829 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2ffr_A | 0 | 102 | 944 | 23 | 817 | A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylam |
| PDB | 2gj4_A | 0 | 102 | 944 | 23 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 4el5_A | 0 | 102 | 944 | 23 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 4el0_A | 0 | 102 | 944 | 23 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778303 | 864 | 119 | 950 | 0 |
| HO797178 | 384 | 567 | 950 | 0 |
| HO613954 | 506 | 445 | 950 | 0 |
| HO418036 | 579 | 305 | 869 | 0 |
| HO778303 | 125 | 3 | 121 | 0.0000000000008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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