| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 323329 |
| Family | GH3 |
| Protein Properties | Length: 607 Molecular Weight: 65830.9 Isoelectric Point: 5.5503 |
| Chromosome | Chromosome/Scaffold: 5 Start: 13014838 End: 13017600 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 88 | 323 | 0 |
| LASRLGIPIIYGTDAVHGNNNVYGATVFPHNIGLGATRDADLVRRIGAATALEVRASGVHWTFAPCVAVLGDPRWGRCYESYGEAAKIVCEMSSLISGLQ GEPPEEHPNGYPFLAGRNNVVACAKHFVGDGGTDKGLSEGNTIASYEDLEKIHVAPYLNCISQGVCTVMASFSSWNESRLHSDYFLLTEVLKQKLGFKGF LVSDWDGLETISKPEGSNYRNCVKLGINAGIDMVMV | |||
| Full Sequence |
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| Protein Sequence Length: 607 Download |
| MPETDDSSCV YKNRDAPVEA RVKDLLSRMT LPEKIGQMTQ IERSVASPQV ITHSFIGSVQ 60 SGAGSWPFED AKSSDWADMI DGFQRSALAS RLGIPIIYGT DAVHGNNNVY GATVFPHNIG 120 LGATRDADLV RRIGAATALE VRASGVHWTF APCVAVLGDP RWGRCYESYG EAAKIVCEMS 180 SLISGLQGEP PEEHPNGYPF LAGRNNVVAC AKHFVGDGGT DKGLSEGNTI ASYEDLEKIH 240 VAPYLNCISQ GVCTVMASFS SWNESRLHSD YFLLTEVLKQ KLGFKGFLVS DWDGLETISK 300 PEGSNYRNCV KLGINAGIDM VMVPFKYEQF IQDMTDLVES GEIPMARVND AVERILRVKF 360 VAGLFEHPFS DRSLLGTVGC KRVAREAVRK SLVLLKNGKN ANTPFLPLDR NAKRILVVGM 420 HANDLGNQCG GWTKTKSGQS GRITIGTTLL DAIKAAVGDK TEVIYEKTPT KETLASSEGF 480 SYAIVAVGEP PYAEMKGDNS ELTIPFKSNN IITAVAEKMP TLVILFSGRP MVLEPTVLEK 540 TEALVAAWFP GTEGQGITDV IFGNYDFKGK LPVSWFKRVD QLPLNADADS YDPLFPIGFG 600 LTSNSG* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 7.0e-38 | 13 | 591 | 636 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-51 | 392 | 602 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 8.0e-81 | 30 | 358 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 5.0e-82 | 19 | 602 | 655 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 3.0e-82 | 29 | 452 | 436 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY25449.1 | 0 | 29 | 606 | 1 | 581 | At3g47010 [Arabidopsis thaliana] |
| RefSeq | NP_190284.1 | 0 | 5 | 604 | 4 | 606 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | NP_190285.3 | 0 | 1 | 606 | 1 | 609 | hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_190288.1 | 0 | 3 | 605 | 2 | 632 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | NP_190289.1 | 0 | 5 | 605 | 4 | 605 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 10 | 605 | 4 | 601 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1iex_A | 0 | 10 | 605 | 4 | 601 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1iew_A | 0 | 10 | 605 | 4 | 601 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1iev_A | 0 | 10 | 605 | 4 | 601 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ieq_A | 0 | 10 | 605 | 4 | 601 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX132989 | 299 | 57 | 355 | 0 |
| EX134175 | 297 | 314 | 607 | 0 |
| DY265467 | 325 | 137 | 458 | 0 |
| ES905148 | 271 | 9 | 279 | 0 |
| EL455042 | 312 | 64 | 375 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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