CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID32488.m000020
FamilyGT41
Protein PropertiesLength: 182 Molecular Weight: 20443.5 Isoelectric Point: 6.3524
ChromosomeChromosome/Scaffold: 32488 Start: 118 End: 666
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT4121770
  FKILPAVFDVWMRLLRETPNSVLWLLQSNPLAERNLKAEAQARGVAAERLIFAPRLPLAQHLARQQWADLLLDTLPYNAHTTASDALWTGVPMVTCLGDT
  FAGRVAASLLHAVGLPELITHSLEDYAAWAVRLAHSPAELARFKRQLLAARDTAPLFDAAQFTRDIESLYDEMWES
Full Sequence
Protein Sequence     Length: 182     Download
SFKILPAVFD VWMRLLRETP NSVLWLLQSN PLAERNLKAE AQARGVAAER LIFAPRLPLA    60
QHLARQQWAD LLLDTLPYNA HTTASDALWT GVPMVTCLGD TFAGRVAASL LHAVGLPELI    120
THSLEDYAAW AVRLAHSPAE LARFKRQLLA ARDTAPLFDA AQFTRDIESL YDEMWESWLK    180
QT 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR03999thiol_BshA0.00269174119+
cd04962GT1_like_55.0e-53174187+
pfam13844Glyco_transf_411.0e-502175174+
COG3914Spy7.0e-552176177+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002538503.1011821182hypothetical protein RCOM_1858570 [Ricinus communis]
RefSeqYP_001155273.101178431608TPR repeat-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1]
RefSeqYP_001526382.101174591764TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
RefSeqYP_001831583.101178578755TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039]
RefSeqYP_545498.101171521691TPR repeat-containing protein [Methylobacillus flagellatus KT]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4gz6_D2e-402178533709A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph.
PDB4gz6_C2e-402178533709A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph.
PDB4gz6_B2e-402178533709A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph.
PDB4gz6_A2e-402178533709A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph.
PDB4gz5_D2e-402178533709A Chain A, Crystal Structure Of N370s Glucocerebrosidase At Acidic Ph.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HS98068918121821.4013e-45
FL93305717621761e-39
CA25434817521761e-39
FC04222517831772e-39
CN81808417621761e-38
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_058_00216.4.334.533Aquca_058_00216.4.334.533Aquca_058_00216.3.560.759Aquca_058_00216.3.560.759Aquca_058_00216.1.773.973
Aquca_058_00216.1.773.973
Arabidopsis lyrata896453.754.961896453.754.961
Arabidopsis thalianaAT3G04240.1.754.961AT3G04240.1.754.961
Brachypodium distachyonBradi3g43577.3.780.979Bradi3g43577.3.780.979Bradi5g06647.1.792.998Bradi5g06647.1.792.998Bradi2g58616.1.761.965
Bradi2g58616.1.761.965
Brassica rapaBra040144.752.961Bra040144.752.961
Carica papayaevm.model.supercontig_51.46.533.743evm.model.supercontig_51.46.533.743
Capsella rubellaCarubv10012900m.754.955Carubv10012900m.754.955
Citrus clementinaCiclev10018711m.753.949Ciclev10018711m.753.949
Citrus sinensisorange1.1g003557m.591.791orange1.1g003557m.591.791orange1.1g002431m.702.902orange1.1g002431m.702.902orange1.1g002729m.702.886
orange1.1g002729m.702.886
Cucumis sativusCucsa.027630.1.766.964Cucsa.027630.1.766.964
Eucalyptus grandisEucgr.L00641.1.730.929Eucgr.L00641.1.730.929
Fragaria vescamrna16720.1-v1.0-hybrid.753.952mrna16720.1-v1.0-hybrid.753.952
Glycine maxGlyma10g31190.1.767.969Glyma10g31190.1.767.969Glyma20g36330.1.767.969Glyma20g36330.1.767.969
Gossypium raimondiiGorai.007G271100.1Gorai.013G189100.3.575.778Gorai.013G189100.3.575.778Gorai.013G189100.1.770.972Gorai.013G189100.1.770.972
Gorai.011G150500.5.705.913Gorai.011G150500.5.705.913Gorai.011G150500.4.705.913Gorai.011G150500.4.705.913Gorai.011G150500.2.778.986
Gorai.011G150500.2.778.986Gorai.011G150500.1.784.992Gorai.011G150500.1.784.992Gorai.007G271100.2Gorai.013G189100.2.770.954
Gorai.013G189100.2.770.954
Linum usitatissimumLus10003576.755.956Lus10003576.755.956Lus10004779.756.956Lus10004779.756.956Lus10003113.756.956
Lus10003113.756.956
Malus domesticaMDP0000233292.759.959MDP0000233292.759.959
Manihot esculentacassava4.1_001015m.753.953cassava4.1_001015m.753.953cassava4.1_002695m.485.686cassava4.1_002695m.485.686cassava4.1_002691m.485.686
cassava4.1_002691m.485.686cassava4.1_001021m.752.953cassava4.1_001021m.752.953
Medicago truncatulaMedtr1g079510.2.521.726Medtr1g079510.2.521.726Medtr1g079510.1.763.967Medtr1g079510.1.763.967
Mimulus guttatusmgv1a000777m.768.972mgv1a000777m.768.972mgv1a000982m.703.906mgv1a000982m.703.906
Oryza sativaLOC_Os02g28830.1.426.628LOC_Os02g28830.1.426.628LOC_Os01g68680.1.758.959LOC_Os01g68680.1.758.959
Panicum virgatumPavirv00063187m.788.989Pavirv00063187m.788.989Pavirv00016961m
Physcomitrella patensPp1s177_132V6.1.776.975Pp1s177_132V6.1.776.975Pp1s263_4V6.1.778.976Pp1s263_4V6.1.778.976
Phaseolus vulgarisPhvul.007G119800.1.768.970Phvul.007G119800.1.768.970
Picea abiesMA_247226g0010.480.681MA_247226g0010.480.681MA_76964g0020.545.746MA_76964g0020.545.746
Populus trichocarpaPotri.013G051400.7.383.584Potri.013G051400.7.383.584Potri.013G051400.6.524.724Potri.013G051400.6.524.724Potri.013G051400.2.763.963
Potri.013G051400.2.763.963Potri.019G025600.6.390.588Potri.019G025600.6.390.588Potri.019G025600.5.526.724Potri.019G025600.5.526.724
Potri.019G025600.4.594.792Potri.019G025600.4.594.792Potri.019G025600.3.655.853Potri.019G025600.3.655.853Potri.019G025600.2.761.959
Potri.019G025600.2.761.959Potri.019G025600.1.761.959Potri.019G025600.1.761.959Potri.013G051400.1.763.964Potri.013G051400.1.763.964
Potri.013G051400.3.763.961Potri.013G051400.3.763.961Potri.013G051400.4.763.947Potri.013G051400.4.763.947
Prunus persicappa000862m.759.959ppa000862m.759.959
Ricinus communis29680.m001749.759.96029680.m001749.759.96039707.m000015
Setaria italicaSi016197m.790.991Si016197m.790.991Si000265m.652.855Si000265m.652.855
Selaginella moellendorffii143846.655.856143846.655.856
Sorghum bicolorSb04g019560.1.790.998Sb04g019560.1.790.998
Thellungiella halophilaThhalv10019996m.754.959Thhalv10019996m.754.959Thhalv10020000m.729.933Thhalv10020000m.729.933
Vitis viniferaGSVIVT01026359001.766.967GSVIVT01026359001.766.967
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny