| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 325328 |
| Family | AA1 |
| Protein Properties | Length: 570 Molecular Weight: 63014.7 Isoelectric Point: 7.4614 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2720833 End: 2722806 |
| Description | laccase 13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 21 | 552 | 0 |
| AEVHFHEFVVQETPVKRLCRVHNSITVNGQFPGPTLEVRNGDSLVITAINKARYNITLHWHGIRQMRNPWADGPEYITQCPIQPGGSYTYRFTIEDQEGT LWWHAHSRWLRATVYGALIIRPPLSSPHYPFPVIPKREITLLLGEWWDRNPMDVLNLAQFTGAAPNISDAFTINGQPGDLYRCSSQETLRFLVGSGEIVL LRVINSALNQELFFGVANHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLLTADQPPAHYYMAAHAYNSANAAFDNTTTTAILKYKDASCVTLQGKSQAQ AIPAQLPGFNDTATAAAFTAQMKSPSKVKVPLEIDENLFFTVGLGLFNCPTPNTQRCQGPNGTRFTASINNVSFVFPKQNSIMQAYYQGTPAGVFTTDFP PTPPVTFDYTGNVSRGLWQPTRGTKAYKLKFNSKVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNPNTDTASFNLIDPPRRNTIGTPPGGWVAIR FVANNPGAWLMHCHLDSHIFWGLAMVFLVENG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 570 Download |
| MEQIRSFFVF LAVLLASLVN AEVHFHEFVV QETPVKRLCR VHNSITVNGQ FPGPTLEVRN 60 GDSLVITAIN KARYNITLHW HGIRQMRNPW ADGPEYITQC PIQPGGSYTY RFTIEDQEGT 120 LWWHAHSRWL RATVYGALII RPPLSSPHYP FPVIPKREIT LLLGEWWDRN PMDVLNLAQF 180 TGAAPNISDA FTINGQPGDL YRCSSQETLR FLVGSGEIVL LRVINSALNQ ELFFGVANHK 240 LTVVAADASY TKPFSTNVIM LGPGQTTDVL LTADQPPAHY YMAAHAYNSA NAAFDNTTTT 300 AILKYKDASC VTLQGKSQAQ AIPAQLPGFN DTATAAAFTA QMKSPSKVKV PLEIDENLFF 360 TVGLGLFNCP TPNTQRCQGP NGTRFTASIN NVSFVFPKQN SIMQAYYQGT PAGVFTTDFP 420 PTPPVTFDYT GNVSRGLWQP TRGTKAYKLK FNSKVQIILQ DTSIVTTENH PMHLHGYEFY 480 VVGTGVGNFN PNTDTASFNL IDPPRRNTIG TPPGGWVAIR FVANNPGAWL MHCHLDSHIF 540 WGLAMVFLVE NGEGHLQSVQ SPPLDLPQC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 3.0e-39 | 430 | 553 | 124 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-54 | 29 | 145 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 2.0e-68 | 45 | 547 | 554 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-83 | 39 | 547 | 549 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 21 | 569 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180580.1 | 0 | 1 | 569 | 1 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
| RefSeq | NP_196330.3 | 0 | 1 | 569 | 1 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002319955.1 | 0 | 6 | 569 | 12 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326089.1 | 0 | 4 | 569 | 16 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516345.1 | 0 | 14 | 569 | 25 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 39 | 547 | 19 | 521 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 1asq_A | 0 | 39 | 547 | 19 | 521 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 1asp_B | 0 | 39 | 547 | 19 | 521 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 1asp_A | 0 | 39 | 547 | 19 | 521 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 1aso_B | 0 | 39 | 547 | 19 | 521 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
