Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 325518 |
Family | GH3 |
Protein Properties | Length: 781 Molecular Weight: 84080.4 Isoelectric Point: 6.4521 |
Chromosome | Chromosome/Scaffold: 6 Start: 3829551 End: 3832471 |
Description | beta-xylosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 87 | 336 | 0 |
GVSRLGIPAYKWWSEALHGVSNVGGGSSFSGQVPGATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGSAGLTFWSPNVNIFRDPRWGRGQETPGE DPELSSKYAVAYVRGLQETDGGDPNRLKVAACCKHYTAYDVDNWKDVHRFTFNAVVNQQDMADTFQPPFKSCVVDGNVASVMCSYNQVNGKPTCADPDLL SGVIRGQWKLNGYIVSDCDSVDVLYTKQHYTKTPEEAVAKSILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 781 Download |
MASSSLTERN RALFSVSTLL LCFLLCISEQ SNAQSSPVFA CDVTGNPSLA GLRFCNTGLN 60 IKSRVTDLVG RLTLEEKIGF LGSNAIGVSR LGIPAYKWWS EALHGVSNVG GGSSFSGQVP 120 GATSFPQVIL TAASFNVSLF QAIGKVVSTE ARAMYNVGSA GLTFWSPNVN IFRDPRWGRG 180 QETPGEDPEL SSKYAVAYVR GLQETDGGDP NRLKVAACCK HYTAYDVDNW KDVHRFTFNA 240 VVNQQDMADT FQPPFKSCVV DGNVASVMCS YNQVNGKPTC ADPDLLSGVI RGQWKLNGYI 300 VSDCDSVDVL YTKQHYTKTP EEAVAKSILA GLDLNCDHFT GQYAMKAVKV GLVNETAIDK 360 AISNNFATLM RLGFFDGDPK KQQLYGGLGP NDVCTANNQE LARDAARQGI VLLKNSAGSL 420 PLSPSAIKTL AVIGPNANAT ETMIGNYNGI PCKYTTPLQG LAETVSSTYQ LGCNVACAEP 480 DLGSAAALAA SADAVVLVMG ADQSIEQENL DRLDLYLPGK QQELVTQVAK VAKGPVVLVI 540 MSGGAFDITF AKNEEKITGI MWVGYPGEAG GLAIADVIFG RHNPSGNLPM TWYPQSYVEK 600 VPMTNMNMRP DKSNGYPGRT YRFYTGETVY AFGDGLSYTN FNHQILKAPK LVSLDLDENH 660 ACRSSECQSV DAIGPHCDNA VGGGLNFEVQ LKVRNVGDRE GSHTVFLFTT PPEVHGSPRK 720 HLLGFEKIRL GEKEETVIRF NVDVCKDLSV VDEIGKRKIA LGHYLLHVGS FKHSLTISVS 780 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-52 | 410 | 639 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 4.0e-58 | 85 | 475 | 397 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-66 | 73 | 364 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-83 | 40 | 744 | 797 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 19 | 779 | 777 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 59 | 769 | 54 | 722 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3u48_A | 0 | 59 | 769 | 54 | 722 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3u4a_B | 0 | 59 | 769 | 54 | 722 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3u4a_A | 0 | 59 | 769 | 54 | 722 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 2x41_A | 4e-39 | 63 | 778 | 2 | 708 | A Chain A, Arabidopsis Thaliana Peroxidase N |