| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 326109 |
| Family | GH5 |
| Protein Properties | Length: 489 Molecular Weight: 54706.9 Isoelectric Point: 7.928 |
| Chromosome | Chromosome/Scaffold: 6 Start: 6853892 End: 6856757 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 33 | 347 | 1.69978e-42 |
| IVDEKGQRVKLACVNWPAHLQPTVAEGLSKQPLDSISKKIVSMGFNCVRLTWPLDLMTNDTLALNVTVKQSFESLKLFEDVLGIQTHNPKILHLPLFNAF QEVVSNLGQNGVMVILDNHLTTPGWCCGENDLDAFFGYPKFDPTVWAKGLGKMATLFRNFTNVIGMSLRNEPRGARDYPDLWFRHMPQGAEVVHAANPKL LVILSGIDFDTNLSFLRDRSVNVSFTNKLVFELHWYSFSDGRDSWRKHNSNDFCVKIIEKVTHNGGFLIGRGFPLILSEFGTDQRGGDISGNRYMNCLVA WAAENDLDWAVWALT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MTRSFYFCLF FLFISWISKL TTSYHLSTKS RWIVDEKGQR VKLACVNWPA HLQPTVAEGL 60 SKQPLDSISK KIVSMGFNCV RLTWPLDLMT NDTLALNVTV KQSFESLKLF EDVLGIQTHN 120 PKILHLPLFN AFQEVVSNLG QNGVMVILDN HLTTPGWCCG ENDLDAFFGY PKFDPTVWAK 180 GLGKMATLFR NFTNVIGMSL RNEPRGARDY PDLWFRHMPQ GAEVVHAANP KLLVILSGID 240 FDTNLSFLRD RSVNVSFTNK LVFELHWYSF SDGRDSWRKH NSNDFCVKII EKVTHNGGFL 300 IGRGFPLILS EFGTDQRGGD ISGNRYMNCL VAWAAENDLD WAVWALTGDY YLRTGPGLRP 360 NNNILFHPST GLCVTNNPSD NLPTLGLGPC PKSDPWTFNP QEGILWVNKM CVEAPNVAGQ 420 KVKLGFGTKC SKLGQISATK MHLSFKTSNG LLLCLDADER DNSVVANPCK CLTMDASCDP 480 ASQWFKVL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 1.0e-5 | 15 | 214 | 204 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 8.0e-15 | 62 | 349 | 295 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 23 | 488 | 2 | 503 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | NP_172772.2 | 0 | 23 | 488 | 32 | 533 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197172.1 | 0 | 1 | 488 | 1 | 488 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197252.1 | 0 | 24 | 488 | 26 | 526 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002515055.1 | 0 | 21 | 488 | 29 | 531 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00000000000006 | 25 | 314 | 5 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000000006 | 25 | 314 | 5 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000000000007 | 25 | 314 | 5 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000000000007 | 25 | 314 | 5 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 2zun_C | 0.00000002 | 41 | 349 | 61 | 382 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
