| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 326467 |
| Family | CE8 |
| Protein Properties | Length: 528 Molecular Weight: 58580.6 Isoelectric Point: 9.1554 |
| Chromosome | Chromosome/Scaffold: 6 Start: 8853076 End: 8855248 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 230 | 502 | 0 |
| VVVAKDGSGDYRTVMEAVTAAHANGRIHKHEITLIGEGKDETVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNTAGPGGHQAIALSITSDQSVLY RCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQLQNTGFALHSCRIRTDSDLSPVKHMYSSYLGRP WRKYSRSIVMESYIDDAIAEEGWAGWLDSGDEVLKTLYFGEFKNYGPKARVSKRVTWEGFHLIGFEDASYFSV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MGIIDMVFFW VLLVNALLIV NASSRNLPFA YQNELQRHCS STKYTSLCVQ NLREFRHGSL 60 DGLDFVSVLV NKTISDSNLL IPPLSSSMGS SELVSLEDST YTLPSPSVSD SCERLMKMST 120 RRLRQAMEAL NGSSRKRHTK HDVQTWLSAA ITFQQACKDS ILDYRETSPS AAISHIKQKM 180 DHLSRLVSNS LALVDTIMQN PKPKTKSTGL PRWVTAGERR LLAGRARAHV VVAKDGSGDY 240 RTVMEAVTAA HANGRIHKHE ITLIGEGKDE TVIVGDDSAT GGTSVPDTAT MTVTGDGFIA 300 RDIGIKNTAG PGGHQAIALS ITSDQSVLYR CSISGYQDTL YAAALRQFYR ECDIYGTIDF 360 IFGNAAAVFQ SCNIFLRRPH GVKAYNVILA NGRTDQLQNT GFALHSCRIR TDSDLSPVKH 420 MYSSYLGRPW RKYSRSIVME SYIDDAIAEE GWAGWLDSGD EVLKTLYFGE FKNYGPKARV 480 SKRVTWEGFH LIGFEDASYF SVVKKRKGED VTNGFKYKIK IKIQYRD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 2.0e-103 | 110 | 502 | 438 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02170 | PLN02170 | 6.0e-104 | 135 | 490 | 390 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-114 | 112 | 508 | 422 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-130 | 229 | 502 | 295 | + Pectinesterase. | ||
| PLN02698 | PLN02698 | 0 | 3 | 524 | 529 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK24761.1 | 0 | 112 | 509 | 115 | 541 | unknown [Picea sitchensis] |
| GenBank | ABK24883.1 | 0 | 39 | 504 | 69 | 549 | unknown [Picea sitchensis] |
| RefSeq | NP_197586.1 | 0 | 21 | 524 | 21 | 511 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277293.1 | 0 | 30 | 502 | 4 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516196.1 | 0 | 3 | 504 | 1 | 507 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 228 | 492 | 3 | 283 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 229 | 501 | 8 | 303 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 2e-18 | 288 | 482 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 2e-18 | 288 | 482 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 2e-18 | 288 | 482 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
