| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 327181 |
| Family | GH116 |
| Protein Properties | Length: 922 Molecular Weight: 104488 Isoelectric Point: 6.4454 |
| Chromosome | Chromosome/Scaffold: 6 Start: 19958997 End: 19964352 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH116 | 493 | 854 | 0 |
| GQFIYLEGIEYLMYNTYDVHFYSSFALLSLFPKLELSIQRDFAATVLFQDPTKKQIMSSGEWVPRKLLGSVPHDIGLNDPWLELNEYNFFNTDRWKDLNA KFVLQVYRDVVSTGDQSFAKAVWPSVYTAVAYLDQFDKDEDEMIENEGFPDQTYDAWSVKGVSAYCGGLWVAALQAASAFASIVGENGVAIYFNTKYEKA KSVYEKLWNGSYFNYDDSGSGSSSSILADQLAGQWYARACGLKPITKEEWIKKALETIYEFNVMKVKGGTRGAVNGMSPDGQVDTNSLVSKEVWAGTTYS VAACMIQEGQRERGFQTASGIYEAVWSDRGLSCSFQTPEAWNMNDEYRSLCYMRPLAIWSIQ | |||
| Full Sequence |
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| Protein Sequence Length: 922 Download |
| MQKNDHMESE LQTQMVGNER LPQVTWQRKL NSKVKNPSEF KMSIRDVLHL FPIGYRLWSH 60 TKEEAKKGRA SMYDIFKKRH VTGDHGVPLG GIGGGSIGRS YKGEFQQFKL FPKVCEEAPI 120 LTNQFSVFVM RSGGVNYSSV LCPTKPKSVR GKTEELGIES WDWNMKGYKS MYHALYPRSW 180 TIYNEPDPEL RIVSRQISPF IPHNYKESSL PVSVFTFTVT NLGKEEATVT LLFTWENSVG 240 GASGLTGEHF NSTMMERDGV HAIALHHKTS NGHPPVTYAI AAQETEDVHV SECSCFLVSG 300 HSPKDITAKE MWDEIKKNKS FDGLNSEPGS PSRPGTSIGA AIAANVKVPP GCDRTVMFSL 360 SWDCPEVRFN EKTYHRRYTK FYGNLGDAAV KMARDALLNY VDWESQIEAW QSPILSDTAL 420 PDWYRVTLFN ELYYFNSGGT IWTDGLPPKE RIERSKIINT EQNNIVTELF KKINVICAQI 480 HSPQSLNAEE HIGQFIYLEG IEYLMYNTYD VHFYSSFALL SLFPKLELSI QRDFAATVLF 540 QDPTKKQIMS SGEWVPRKLL GSVPHDIGLN DPWLELNEYN FFNTDRWKDL NAKFVLQVYR 600 DVVSTGDQSF AKAVWPSVYT AVAYLDQFDK DEDEMIENEG FPDQTYDAWS VKGVSAYCGG 660 LWVAALQAAS AFASIVGENG VAIYFNTKYE KAKSVYEKLW NGSYFNYDDS GSGSSSSILA 720 DQLAGQWYAR ACGLKPITKE EWIKKALETI YEFNVMKVKG GTRGAVNGMS PDGQVDTNSL 780 VSKEVWAGTT YSVAACMIQE GQRERGFQTA SGIYEAVWSD RGLSCSFQTP EAWNMNDEYR 840 SLCYMRPLAI WSIQWALTRT QSFGEEKEKL VKGEEEESDL LLRQHKGFKD VARFVKIVPT 900 RNEHRSRLQH TYEAVLNILR L* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12215 | GBA2_N | 2.0e-55 | 121 | 403 | 292 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-98 | 153 | 857 | 735 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 5.0e-156 | 493 | 855 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM19831.1 | 0 | 1 | 921 | 1 | 922 | AT4g10060/T5L19_190 [Arabidopsis thaliana] |
| GenBank | AAO42222.1 | 0 | 10 | 921 | 6 | 947 | unknown protein [Arabidopsis thaliana] |
| EMBL | CAB39630.1 | 0 | 211 | 921 | 71 | 750 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_174631.2 | 0 | 10 | 921 | 6 | 947 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | NP_192744.6 | 0 | 1 | 921 | 1 | 922 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY292040 | 360 | 506 | 862 | 0 |
| JG703027 | 328 | 511 | 838 | 0 |
| FC917648 | 306 | 506 | 811 | 0 |
| EG467051 | 213 | 195 | 407 | 0 |
| EG467053 | 213 | 195 | 407 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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