| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 327458 |
| Family | CBM43 |
| Protein Properties | Length: 144 Molecular Weight: 15719.9 Isoelectric Point: 8.389 |
| Chromosome | Chromosome/Scaffold: 6 Start: 22936579 End: 22937309 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 23 | 106 | 6.5e-34 |
| WCVARPGATQAELQRALDWACGIGRVDCSVIERHGDCYEPDTILSHASFAFNAYYQTNGNNRIACYFGGTATLTKINPSYGKCS | |||
| Full Sequence |
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| Protein Sequence Length: 144 Download |
| MTIRPESLVG PQGNTTFLEG TTWCVARPGA TQAELQRALD WACGIGRVDC SVIERHGDCY 60 EPDTILSHAS FAFNAYYQTN GNNRIACYFG GTATLTKINP SYGKCSYDVS KSEVSAARSL 120 SKCKPRCFLL MYIGLLFLIS RRG* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-20 | 22 | 94 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-40 | 22 | 107 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-21 | 22 | 107 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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