Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 32791.m000022 |
Family | GT4 |
Protein Properties | Length: 422 Molecular Weight: 47628.9 Isoelectric Point: 9.2222 |
Chromosome | Chromosome/Scaffold: 32791 Start: 459 End: 1727 |
Description | sulfoquinovosyldiacylglycerol 2 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT4 | 226 | 373 | 1.6e-32 |
HILYVGRFLHWKGMDIGLRAIAEVTSRGIPVRLTMIGQGPERQRWQILTAHLKLAYCVTWVPWMPQHELMQAYRNFDALLFPSLHDSSGNVVLESMAGGL PVVCLGLGGPAEMVDGQCGRVVPVKDKSSEEVVNELADALAEIAANPT |
Full Sequence |
---|
Protein Sequence Length: 422 Download |
MSAYACEPDK GSEPGVGWRW ALETAALGHE VWVMTRANNR PGIEKALRGL AHAPRNLNFV 60 YFDLPAWARW WKKGPFGVHL YYLLWQWGAY LQARKLHQAE HFDTVHHITF GVIRHPSFMW 120 RLGVPFIVGP AGGGERAPME LRKWMSLGGQ AKEILRDAMN WLARFDPFVR QTYARASVIL 180 LKTPQSLAWL PAPYRVKARC QLEIGVERQV EDAQRVVPFK SHQALHILYV GRFLHWKGMD 240 IGLRAIAEVT SRGIPVRLTM IGQGPERQRW QILTAHLKLA YCVTWVPWMP QHELMQAYRN 300 FDALLFPSLH DSSGNVVLES MAGGLPVVCL GLGGPAEMVD GQCGRVVPVK DKSSEEVVNE 360 LADALAEIAA NPTMVRELRD GALARSYEYS WRRVVSSVWG EQGDGYRAAT QNVQEEIAYA 420 SA |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03795 | GT1_like_4 | 2.0e-21 | 154 | 389 | 247 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. | ||
COG0438 | RfaG | 2.0e-25 | 75 | 395 | 328 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
cd03799 | GT1_amsK_like | 1.0e-27 | 222 | 385 | 171 | + This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. | ||
cd03798 | GT1_wlbH_like | 5.0e-31 | 14 | 395 | 402 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03801 | GT1_YqgM_like | 1.0e-31 | 25 | 395 | 384 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002536287.1 | 0 | 1 | 422 | 1 | 422 | glycosyltransferase, putative [Ricinus communis] |
RefSeq | YP_001519821.1 | 0 | 1 | 392 | 9 | 395 | glycosyl transferase, group 1 family protein, putative [Acaryochloris marina MBIC11017] |
RefSeq | YP_003158209.1 | 0 | 1 | 382 | 7 | 382 | glycosyl transferase group 1 [Desulfomicrobium baculatum DSM 4028] |
RefSeq | YP_594013.1 | 0 | 1 | 391 | 5 | 389 | glycosyl transferase, group 1 [Deinococcus geothermalis DSM 11300] |
RefSeq | ZP_01622535.1 | 0 | 1 | 391 | 8 | 393 | putative glycosyltransferase protein [Lyngbya sp. PCC 8106] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3c48_B | 0.00000007 | 205 | 416 | 225 | 434 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 3c48_A | 0.00000007 | 205 | 416 | 225 | 434 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 3c4v_B | 0.00000008 | 205 | 416 | 205 | 414 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 3c4v_A | 0.00000008 | 205 | 416 | 205 | 414 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 3c4q_B | 0.00000008 | 205 | 416 | 205 | 414 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DT763798 | 192 | 222 | 409 | 0.00002 |
CT884830 | 96 | 227 | 322 | 0.00002 |
CU718666 | 96 | 227 | 322 | 0.00005 |
GT710061 | 100 | 227 | 322 | 0.00005 |
CT872776 | 96 | 227 | 322 | 0.00006 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|