| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 328883 |
| Family | AA1 |
| Protein Properties | Length: 547 Molecular Weight: 61874.8 Isoelectric Point: 10.0294 |
| Chromosome | Chromosome/Scaffold: 7 Start: 5873748 End: 5876119 |
| Description | SKU5 similar 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 32 | 499 | 0 |
| RVTYGEISLRTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAV QKLAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILDGGRKLPTMPDGVMINGQGLSSVYSITVDKGKTYRFRLSNVGLQSSLNFEIL GHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIGADVGVGSTLHYSNSKGHKIIPSRAPDPNDIEWSIKQAQSIRTNLTAS GPRTDPQGSYHYGKMKISRNLILESSAALVKRKQRYAISGVSFVPPDTPLKLADHFKIKNVFKVGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNRE KIVQSYHLDGYNFWVVGINKGIWSHASRREYNLKDAISRSTTQVYPESWTAIYVALDNVGMWNLRSQF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 547 Download |
| MRWWLNGGVW MMMTTTIIYF VKAGDTLFYN WRVTYGEISL RTLPRRGILI NGQFPGPEIR 60 SLTNDNLVIN VHNDLDEPFL LSWNGVHMRK NSYQDGVYGT TCPIPPGKNY TYDFQVKDQV 120 GSYFYFPSLA VQKLAGGYGS LRIYSLPRIP VPFPEPAGDF TFLIGDWYRR NHTTLKKILD 180 GGRKLPTMPD GVMINGQGLS SVYSITVDKG KTYRFRLSNV GLQSSLNFEI LGHQLKLIEV 240 EGTHTVQSMY TSLDIHVGQT YSVLVTMDQP PQNYSIVVST RFIGADVGVG STLHYSNSKG 300 HKIIPSRAPD PNDIEWSIKQ AQSIRTNLTA SGPRTDPQGS YHYGKMKISR NLILESSAAL 360 VKRKQRYAIS GVSFVPPDTP LKLADHFKIK NVFKVGSIPD KPRRGGGMRL DTSVMGAHHN 420 AFLEIIFQNR EKIVQSYHLD GYNFWVVGIN KGIWSHASRR EYNLKDAISR STTQVYPESW 480 TAIYVALDNV GMWNLRSQFW ARQYLGQQFY LRVYSPVHSL KDEYPLPKNA LLCGRASNKN 540 MSIITP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 0 | 11 | 546 | 536 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 17 | 542 | 530 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 18 | 536 | 520 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 8 | 534 | 535 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 29 | 537 | 523 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB37498.1 | 0 | 1 | 542 | 1 | 547 | putative pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_194538.1 | 0 | 1 | 546 | 1 | 547 | sks10 (SKU5 Similar 10); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_195555.2 | 0 | 1 | 542 | 1 | 548 | sks9 (SKU5 Similar 9); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002282214.1 | 0 | 6 | 539 | 4 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528421.1 | 0 | 28 | 539 | 31 | 539 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 534 | 6 | 539 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1asq_A | 0 | 29 | 534 | 6 | 539 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1asp_B | 0 | 29 | 534 | 6 | 539 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1asp_A | 0 | 29 | 534 | 6 | 539 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1aso_B | 0 | 29 | 534 | 6 | 539 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
