| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 32959 |
| Family | CBM43 |
| Protein Properties | Length: 430 Molecular Weight: 46482.8 Isoelectric Point: 4.7093 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 349 | 428 | 9.1e-24 |
| WCVLKPGIAVPQGQIDFACSAADCTPLVPDGGSCYSTLSPEQAASYAFNSYFQLKDQVPSSCDFQGNGIITGVDPSTPNC | |||
| GH17 | 4 | 328 | 0 |
| IGVNWGTQMSHPLFAPDVVRALVSNNVGRVKLFEADPRIMSALAGSPLEVMLGIPNDMLETLATDAAAASNWVLMNVTHYYLRKKRVNIRYVAVGNEPFL AGYNKSFEGVTLPALKNIQAALSKAKFADQIKAIVPLNADVLQPRDPGNQDPSTGVFRNDIKMLMDDIVKALASTGAPFTINLYPFISLAQDPNFPSEYA FLDGCFQVQYGQSTYTSVFDATFDMLVAALTDSGFPNMEIIVGEAGWPTDGFPSATPSNARRFNQALVSRIISPSPPGTPMRPGTVLHAYIFSLFDEDLK SIAPGNFERHWGLFTYDGQPKYLLN | |||
| Full Sequence |
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| Protein Sequence Length: 430 Download |
| SGTIGVNWGT QMSHPLFAPD VVRALVSNNV GRVKLFEADP RIMSALAGSP LEVMLGIPND 60 MLETLATDAA AASNWVLMNV THYYLRKKRV NIRYVAVGNE PFLAGYNKSF EGVTLPALKN 120 IQAALSKAKF ADQIKAIVPL NADVLQPRDP GNQDPSTGVF RNDIKMLMDD IVKALASTGA 180 PFTINLYPFI SLAQDPNFPS EYAFLDGCFQ VQYGQSTYTS VFDATFDMLV AALTDSGFPN 240 MEIIVGEAGW PTDGFPSATP SNARRFNQAL VSRIISPSPP GTPMRPGTVL HAYIFSLFDE 300 DLKSIAPGNF ERHWGLFTYD GQPKYLLNTS GSSSVLEKVG GVDYYPALWC VLKPGIAVPQ 360 GQIDFACSAA DCTPLVPDGG SCYSTLSPEQ AASYAFNSYF QLKDQVPSSC DFQGNGIITG 420 VDPSTPNCRF |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 240 | 320 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-16 | 348 | 417 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-27 | 348 | 430 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-80 | 4 | 328 | 326 | + Glycosyl hydrolases family 17. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR38156.1 | 0 | 4 | 430 | 38 | 459 | unknown [Zea mays] |
| RefSeq | NP_194843.1 | 0 | 4 | 430 | 27 | 448 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002331390.1 | 0 | 3 | 430 | 13 | 438 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438620.1 | 0 | 4 | 430 | 41 | 462 | hypothetical protein SORBIDRAFT_10g022940 [Sorghum bicolor] |
| RefSeq | XP_002459388.1 | 0 | 4 | 430 | 29 | 455 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 4 | 328 | 3 | 313 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3ur8_A | 0 | 4 | 328 | 3 | 313 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3ur7_B | 0 | 4 | 328 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 4 | 328 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3f55_D | 0 | 4 | 330 | 2 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO797198 | 433 | 4 | 430 | 0 |
| FE510265 | 262 | 71 | 331 | 0 |
| FE466239 | 266 | 91 | 352 | 0 |
| FE706164 | 290 | 92 | 375 | 0 |
| GE474080 | 303 | 32 | 333 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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