Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 329886 |
Family | GH17 |
Protein Properties | Length: 344 Molecular Weight: 37530.3 Isoelectric Point: 6.8086 |
Chromosome | Chromosome/Scaffold: 7 Start: 12233184 End: 12235120 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 23 | 333 | 0 |
VGVCYGMMGNNLPSQSDTIALFRQNNIRRVRLYDPNQAALNALKNTGIEVIIGVPNSDLRSLTNPSSARSWLQNNVLNYYPAVSFKYIAVGNEVSPSNGG DVVLPAIRNVYDALRGANLQDRIKVSTAIDMTLIGNSFPPSSGEFRGDVKWYIDPIIGFLTSTNSALLANIYPYFSYVDNPRDISLSYALFTSPSVVVWD GSRGYQNLFDALLDVIYSAVERSGGGSLPVVVSESGWPSNGGNAASFDNARAYYTNLAARVRENRGTPKRPGRGVETYLFAMFDENQKSPDIEKNFGLFF PNKQPKFPITF |
Full Sequence |
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Protein Sequence Length: 344 Download |
MTPLFILIAL FTTILNPTSG EPVGVCYGMM GNNLPSQSDT IALFRQNNIR RVRLYDPNQA 60 ALNALKNTGI EVIIGVPNSD LRSLTNPSSA RSWLQNNVLN YYPAVSFKYI AVGNEVSPSN 120 GGDVVLPAIR NVYDALRGAN LQDRIKVSTA IDMTLIGNSF PPSSGEFRGD VKWYIDPIIG 180 FLTSTNSALL ANIYPYFSYV DNPRDISLSY ALFTSPSVVV WDGSRGYQNL FDALLDVIYS 240 AVERSGGGSL PVVVSESGWP SNGGNAASFD NARAYYTNLA ARVRENRGTP KRPGRGVETY 300 LFAMFDENQK SPDIEKNFGL FFPNKQPKFP ITFSAAREGS AVE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-6 | 52 | 321 | 285 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-155 | 23 | 333 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP87281.1 | 0 | 2 | 337 | 18 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABG49448.1 | 0 | 2 | 337 | 18 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ACZ74626.1 | 0 | 2 | 337 | 18 | 355 | beta-1,3-glucanase [Hevea brasiliensis] |
EMBL | CAB10405.1 | 0 | 1 | 294 | 1 | 299 | beta-1, 3-glucanase class I precursor [Arabidopsis thaliana] |
RefSeq | NP_193361.4 | 0 | 1 | 343 | 1 | 344 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 334 | 2 | 316 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3f55_C | 0 | 23 | 334 | 2 | 316 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3f55_B | 0 | 23 | 334 | 2 | 316 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3f55_A | 0 | 23 | 334 | 2 | 316 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3em5_D | 0 | 23 | 334 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |