y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 33210.m000034 |
Family | GT1 |
Protein Properties | Length: 185 Molecular Weight: 19943.9 Isoelectric Point: 9.4118 |
Chromosome | Chromosome/Scaffold: 33210 Start: 17 End: 574 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 9 | 182 | 3.3e-30 |
VEAFLAAGEAPVYMGFGSWTPRDILHQTDTLRLFTEAAQLAGCRAIIQSDDAAACGFHSNERMLYVPASPHHLIFPRCAAVVHHGGAGTTQSATLAGKPS VVVAHINEQEHWGMELRRIGIAGKPLHRRSVTATKLAARLRAITPAMRSRAPQVAQLMARENGVATAVRLIEAL |
Full Sequence |
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Protein Sequence Length: 185 Download |
IEGRLTDDVE AFLAAGEAPV YMGFGSWTPR DILHQTDTLR LFTEAAQLAG CRAIIQSDDA 60 AACGFHSNER MLYVPASPHH LIFPRCAAVV HHGGAGTTQS ATLAGKPSVV VAHINEQEHW 120 GMELRRIGIA GKPLHRRSVT ATKLAARLRA ITPAMRSRAP QVAQLMAREN GVATAVRLIE 180 ALPRS 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01426 | MGT | 1.0e-7 | 78 | 182 | 107 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
COG1819 | COG1819 | 3.0e-22 | 2 | 184 | 185 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
cd03784 | GT1_Gtf_like | 9.0e-40 | 2 | 182 | 182 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002536187.1 | 0 | 1 | 185 | 1 | 185 | hypothetical protein RCOM_1879110 [Ricinus communis] |
RefSeq | YP_001535103.1 | 9e-28 | 12 | 182 | 253 | 422 | sterol 3-beta-glucosyltransferase [Salinispora arenicola CNS-205] |
RefSeq | YP_002370931.1 | 1e-27 | 1 | 179 | 232 | 410 | Sterol 3-beta-glucosyltransferase [Cyanothece sp. PCC 8801] |
RefSeq | YP_003302316.1 | 4e-28 | 2 | 182 | 238 | 415 | glycosyl transferase family 28 [Thermomonospora curvata DSM 43183] |
RefSeq | YP_003528349.1 | 4.2039e-45 | 9 | 180 | 246 | 420 | Sterol 3-beta-glucosyltransferase [Nitrosococcus halophilus Nc4] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 7e-20 | 5 | 184 | 209 | 383 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3h4i_A | 7e-20 | 5 | 184 | 209 | 383 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1iir_A | 8e-16 | 2 | 179 | 223 | 394 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 1rrv_B | 0.000000000001 | 5 | 166 | 225 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 0.000000000001 | 5 | 166 | 225 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ769060 | 169 | 16 | 176 | 7e-23 |
FS095542 | 176 | 13 | 185 | 1e-22 |
DY657659 | 173 | 7 | 177 | 4e-22 |
DR091260 | 176 | 4 | 177 | 1e-21 |
AI729743 | 168 | 12 | 177 | 1e-21 |
Sequence Alignments (This image is cropped. Click for full image.) |
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