CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID332819
FamilyGH43
Protein PropertiesLength: 473 Molecular Weight: 54152.8 Isoelectric Point: 8.7468
ChromosomeChromosome/Scaffold: 8 Start: 22255032 End: 22256550
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431713957.7e-34
  KSNTYYWYGEYKDGPTYHAHKKGPARVDIIGVGCYSSKDLWTWKNEGIVLGADETNKTHDLHKSNVLERPKVIYNEKTEKYVMWMHIDDANYTKASVGVA
  ISDNPTGPFEYLYSKRPHGFDSRDMTVFKDDDGVAYLIYSSEVNSVLHIGPLTEDYLDVTPVMKRVMVGQHREAPAIFKYQNIYYMVTSWCTGWAPNEAL
  AHAAESIMGPWEKLGNPCIGGNKVF
Full Sequence
Protein Sequence     Length: 473     Download
MKNNNKYNKK STSLHCNDAG GCRYSFLTIV WTVVGFFLVA HLISLYSRKD NIHQQVSSDQ    60
LQLVHHQHLH HPVVRELVRV EEEILRMPPP RKRSPRTSKR RSRKPIPMVE EFLDEKSPIR    120
HLFFPGIKTA AFGPTKDMGN ETSYYFPGKI WMDTEGNPIQ AHGGGILLDE KSNTYYWYGE    180
YKDGPTYHAH KKGPARVDII GVGCYSSKDL WTWKNEGIVL GADETNKTHD LHKSNVLERP    240
KVIYNEKTEK YVMWMHIDDA NYTKASVGVA ISDNPTGPFE YLYSKRPHGF DSRDMTVFKD    300
DDGVAYLIYS SEVNSVLHIG PLTEDYLDVT PVMKRVMVGQ HREAPAIFKY QNIYYMVTSW    360
CTGWAPNEAL AHAAESIMGP WEKLGNPCIG GNKVFRLTTF FAQSTYVIPL PGVPGAFIFM    420
ADRWNPADLR DSRYVWLPLV IGGPADQPLE FNFGFPLWSR VSIYWHSKWR LP*           480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_22.0e-14240387166+
cd09004GH43_bXyl5.0e-19203386195+
cd08990GH43_AXH_like6.0e-20204382193+
cd08978GH_F2.0e-55173441280+
cd08985GH43_62.0e-129159441284+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI33680.107047225427unnamed protein product [Vitis vinifera]
RefSeqNP_190557.1054726458glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.201947214466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_975008.101147211471glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.10147232492beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F012643918328A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
PDB3vt2_E012643918328A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
PDB3vt2_D012643918328A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
PDB3vt2_C012643918328A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
PDB3vt2_B012643918328A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
Transmembrane Domains
StartEnd
2143
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8561533271454710
GO3743623451344720
EY7037302951564500
GT7395993011444440
GO8017532941794720
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny