| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 33434.m000014 |
| Family | GH3 |
| Protein Properties | Length: 397 Molecular Weight: 42444.2 Isoelectric Point: 6.7215 |
| Chromosome | Chromosome/Scaffold: 33434 Start: 8 End: 1200 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 4 | 184 | 0 |
| TALPSSLATAASFDPAVSEAGGRMIADEARASGFNTFLAGGANLAREPRNGRNFEYVGEDPLLAGRMAAGLINGIQARHMVSTMKHFAVNDHESQRTTVD VTISPEAMRQSDLLAFEIVNDLSKPGSVMCSYNLVNGRWACENEYLLNKTLKQDWKFKGYVMADWGAVHSTADAANYGLDQ | |||
| Full Sequence |
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| Protein Sequence Length: 397 Download |
| MERTALPSSL ATAASFDPAV SEAGGRMIAD EARASGFNTF LAGGANLARE PRNGRNFEYV 60 GEDPLLAGRM AAGLINGIQA RHMVSTMKHF AVNDHESQRT TVDVTISPEA MRQSDLLAFE 120 IVNDLSKPGS VMCSYNLVNG RWACENEYLL NKTLKQDWKF KGYVMADWGA VHSTADAANY 180 GLDQFTGYPC CNHHGPFYSA KNFKEAMNKG DVSMRRLDDM AQRILWPLFR TGVFDDPPKV 240 GKIDFAAHAA VAQRAAEESL ALLKNEGNLL PLANVKSVAV IGGHADKGVL AGGGSSGVTP 300 VGGNAVPNLE PTKWPGPVIY MPSSPLAALK AELPKTKIGY ASGTDIDAAV ALAKQSEVAV 360 VFVTQWMGEG FDGKLELDGN QDALVAAVAR AIRRRSS 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 6.0e-20 | 262 | 384 | 138 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 4.0e-24 | 16 | 286 | 297 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 2.0e-24 | 16 | 361 | 407 | + Probable beta-xylosidase; Provisional | ||
| COG1472 | BglX | 9.0e-51 | 16 | 288 | 289 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-71 | 16 | 225 | 221 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2x41_A | 0 | 4 | 395 | 79 | 489 | A Chain A, Crystal Structure Of Putative Beta-galactosidase From Bacteroides Fragilis |
| PDB | 2x40_A | 0 | 4 | 395 | 79 | 489 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol |
| PDB | 2x42_A | 0 | 4 | 395 | 79 | 489 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
| PDB | 4i3g_B | 2.8026e-45 | 4 | 300 | 112 | 416 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4i3g_A | 2.8026e-45 | 4 | 300 | 112 | 416 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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