| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 34198.m000022 |
| Family | GT19 |
| Protein Properties | Length: 219 Molecular Weight: 24495.6 Isoelectric Point: 9.6582 |
| Chromosome | Chromosome/Scaffold: 34198 Start: 68 End: 727 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 3 | 202 | 0 |
| PDVGQAREKLKLKKNQVVIAMLPGSRQSEVNFHAELLLETAIVFDRLMRENGQQVQFLVPLVTRETRDIFTSAWHQLLTQKPDTAIDLQIMFGHAHDAMT AADAVLVASGTATLEAALLKKPMVITYKMSNMSWQLLKRMRLQPYVGLPNILAGEFIVPELLQKEATPEGVAQTLYNLLADKTGLAVLQEKYRHIHAQLK | |||
| Full Sequence |
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| Protein Sequence Length: 219 Download |
| MEPDVGQARE KLKLKKNQVV IAMLPGSRQS EVNFHAELLL ETAIVFDRLM RENGQQVQFL 60 VPLVTRETRD IFTSAWHQLL TQKPDTAIDL QIMFGHAHDA MTAADAVLVA SGTATLEAAL 120 LKKPMVITYK MSNMSWQLLK RMRLQPYVGL PNILAGEFIV PELLQKEATP EGVAQTLYNL 180 LADKTGLAVL QEKYRHIHAQ LKQNSAQKAA AVVKQFLQA |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14089 | PRK14089 | 2.0e-13 | 12 | 215 | 214 | + ipid-A-disaccharide synthase; Provisional | ||
| pfam02684 | LpxB | 5.0e-36 | 2 | 216 | 217 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| TIGR00215 | lpxB | 7.0e-40 | 3 | 213 | 217 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0763 | LpxB | 7.0e-53 | 2 | 219 | 220 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-65 | 1 | 218 | 220 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002538124.1 | 0 | 1 | 219 | 1 | 219 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| RefSeq | YP_003048588.1 | 0 | 1 | 218 | 169 | 377 | lipid-A-disaccharide synthase [Methylotenera mobilis JLW8] |
| RefSeq | YP_003051170.1 | 0 | 1 | 213 | 169 | 373 | lipid-A-disaccharide synthase [Methylovorus sp. SIP3-4] |
| RefSeq | YP_545626.1 | 0 | 1 | 218 | 169 | 378 | lipid-A-disaccharide synthase [Methylobacillus flagellatus KT] |
| RefSeq | YP_933400.1 | 0 | 1 | 219 | 170 | 380 | lipid-A-disaccharide synthase [Azoarcus sp. BH72] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT582042 | 171 | 14 | 183 | 0.0000000002 |
| DR942694 | 169 | 9 | 177 | 0.0000000002 |
| DR920328 | 169 | 9 | 177 | 0.0000000003 |
| FC359156 | 197 | 7 | 197 | 0.0000000004 |
| GW597347 | 90 | 96 | 185 | 0.0000000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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