| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 346398 |
| Family | GH14 |
| Protein Properties | Length: 678 Molecular Weight: 75580.1 Isoelectric Point: 6.4247 |
| Chromosome | Chromosome/Scaffold: 4 Start: 22316258 End: 22319564 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 250 | 667 | 0 |
| YVMLPLGVINMKCELADRDGLVKHLRILKSIHVDGVKVDCWWGIVEAHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEI GRTNPDIYFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRIELAEFLEDGVISMVEIGLGPCGELRYPSCPIKHGWRYPGVGEFQCYDKYLS KSLRKAAESRGHLFWARGPDNTGSYNSQPQGTGFFCDGGDYDGLYGRFFLKWYSQVLIDHADQILSLAKLVFDSSCIAAKLPDVHWWYRTASHAAELTAG FYNPSNRDGYAAIASTLKKHGATLSFVSGEVQVLNRPDDFSGALGEPEAVAWQVLNAAWDSDTPVARENSLPCHDRVGYNKMLESVKFRNDPDRRHLSSF AYSRLVPALMEEHNIVEF | |||
| Full Sequence |
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| Protein Sequence Length: 678 Download |
| MATDMQKLLG TSEEDDDEEM DMDVKEEDDG DRRNRDTRAA SGSSNDEFMF QQSMQDQVGT 60 PGGGGSRRSR PLEEKERTKL RERHRRAITA RILGGLRRHG NYNLRVRADI NDVIAALARE 120 AGWVVLPDGT TFPAKSQGTK PTGGSSAVAA GSSASHIASQ QTSTPALRVV SSGRRSPVEL 180 SACRMKGVFT PASSPYDKFP TQSPELVGSV NKAEGLVGCS VDVINSKQIL DIPPNLTEQD 240 FSGTPYVPVY VMLPLGVINM KCELADRDGL VKHLRILKSI HVDGVKVDCW WGIVEAHSPQ 300 EYNWTGYRQL FQMVRDLNLK IQVLMSFHEC GGNVGDDVCI PLPHWVAEIG RTNPDIYFTD 360 REGRRNPECL SWGIDKERIL RGRTALEVYF DYMRSFRIEL AEFLEDGVIS MVEIGLGPCG 420 ELRYPSCPIK HGWRYPGVGE FQCYDKYLSK SLRKAAESRG HLFWARGPDN TGSYNSQPQG 480 TGFFCDGGDY DGLYGRFFLK WYSQVLIDHA DQILSLAKLV FDSSCIAAKL PDVHWWYRTA 540 SHAAELTAGF YNPSNRDGYA AIASTLKKHG ATLSFVSGEV QVLNRPDDFS GALGEPEAVA 600 WQVLNAAWDS DTPVARENSL PCHDRVGYNK MLESVKFRND PDRRHLSSFA YSRLVPALME 660 EHNIVEFERF VKKLHGN* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 1.0e-132 | 162 | 674 | 526 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 7.0e-140 | 247 | 674 | 432 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-173 | 246 | 677 | 439 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 676 | 694 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 87 | 677 | 599 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 246 | 677 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 246 | 677 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 246 | 677 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1byd_A | 0 | 246 | 677 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1byc_A | 0 | 246 | 677 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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