y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 350051 |
Family | CBM43 |
Protein Properties | Length: 195 Molecular Weight: 19936.2 Isoelectric Point: 6.8522 |
Chromosome | Chromosome/Scaffold: 6 Start: 3123310 End: 3125572 |
Description | glucan endo-1,3-beta-glucosidase-like protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 21 | 102 | 7.8e-31 |
WCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQAAESCNFTGSATLTTTDPSYTGC |
Full Sequence |
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Protein Sequence Length: 195 Download |
MAALILYLLS LLMAGHSSAS WCVCKTGLSD SVLQKTLDYA CGNGADCNPT HPKGSCFNPD 60 NVRAHCNYAV NSFFQKKGQA AESCNFTGSA TLTTTDPSYT GCAFPSSASG CSGSSSSTVT 120 PGKNSPKGSN SITTFPGGNS PYTGTPSTGL LGGNVTDATG TGFNPDYSTE SSGFALHYSN 180 NLMFTGFCSL LMML* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-18 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-35 | 20 | 104 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-24 | 17 | 106 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |