y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 351756 |
Family | CE10 |
Protein Properties | Length: 345 Molecular Weight: 38283.5 Isoelectric Point: 6.9423 |
Chromosome | Chromosome/Scaffold: 6 Start: 12990273 End: 12991814 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 51 | 338 | 0 |
RKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPANAGPPPSVTDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPE NRYPCAYDDGWAVLNWVNSSSWLKSKKDSKVHIFLVGDSSGGNIVHNVALRAVESGINVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFL PEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQDVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAF |
Full Sequence |
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Protein Sequence Length: 345 Download |
MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV 60 NGVFSFDVII DRQTNLLSRV YRPANAGPPP SVTDLQNPVD GEIVPVIVFF HGGSFAHSSA 120 NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLNWVNSS SWLKSKKDSK 180 VHIFLVGDSS GGNIVHNVAL RAVESGINVL GNILLNPMFG GTERTESEKR LDGKYFVTVR 240 DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL 300 KKAGQDVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 3.0e-6 | 98 | 195 | 111 | + Carboxylesterase type B [Lipid metabolism] | ||
cd00312 | Esterase_lipase | 6.0e-7 | 80 | 201 | 131 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
PRK10162 | PRK10162 | 8.0e-10 | 106 | 259 | 159 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 7.0e-38 | 17 | 342 | 330 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 9.0e-70 | 107 | 321 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2ZSH | 0 | 1 | 342 | 8 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
RefSeq | NP_187163.1 | 0 | 1 | 343 | 1 | 345 | GID1A (GA INSENSITIVE DWARF1A); hydrolase [Arabidopsis thaliana] |
RefSeq | NP_198084.1 | 0 | 1 | 344 | 1 | 344 | GID1C (GA INSENSITIVE DWARF1C); hydrolase [Arabidopsis thaliana] |
RefSeq | XP_002319576.1 | 0 | 1 | 343 | 1 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328407.1 | 0 | 1 | 343 | 1 | 344 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 342 | 8 | 351 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
PDB | 2zsh_A | 0 | 1 | 342 | 8 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 2 | 341 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 2 | 341 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 2 | 341 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795605 | 343 | 2 | 343 | 0 |
ES790010 | 340 | 1 | 339 | 0 |
HO779605 | 345 | 1 | 343 | 0 |
DT574934 | 322 | 19 | 338 | 0 |
EV240117 | 306 | 39 | 343 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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