| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 352501 |
| Family | GT14 |
| Protein Properties | Length: 450 Molecular Weight: 51828.5 Isoelectric Point: 9.377 |
| Chromosome | Chromosome/Scaffold: 6 Start: 23214479 End: 23216083 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT14 | 105 | 361 | 0 |
| LAYLISGTKGDSLRMMRTLQAVYHPRNHYVLHLDLEAPPKERLELAMSVKSDPTFREFENVRVMSQSNLVTYKGPTMIACTLQAVAILLKESLNWDWFIN LSASDYPLVTQDDMLYVFAKLSRNVNFIEHMKLTGWKLNQRAKSIIVDPGLYLSKKTEIAWTTQHRSLPTSFTLFTGSAWVVLTRSFLEYSILGWDNFPR TILMYYTNFVSSPEGYFHTVICNTEEFKSTAIGHDLHYISWDYPPKQHPNSLSIKDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 450 Download |
| MKKVYRKLIW IRDPLARVKR HVSSHSGFRV FRDRRKWMFP FLASFVLSVT LLMSVIYVQF 60 DTSYVEESLP FDNVLEESND YFVESRLRMS LNSTGNSNSS EVPRLAYLIS GTKGDSLRMM 120 RTLQAVYHPR NHYVLHLDLE APPKERLELA MSVKSDPTFR EFENVRVMSQ SNLVTYKGPT 180 MIACTLQAVA ILLKESLNWD WFINLSASDY PLVTQDDMLY VFAKLSRNVN FIEHMKLTGW 240 KLNQRAKSII VDPGLYLSKK TEIAWTTQHR SLPTSFTLFT GSAWVVLTRS FLEYSILGWD 300 NFPRTILMYY TNFVSSPEGY FHTVICNTEE FKSTAIGHDL HYISWDYPPK QHPNSLSIKD 360 FDKMVKSKAP FARKFHKNDP VLDKIDRELL GRTHRFSSGS WCIGSSENGA DPCSVRGDDS 420 VLKPGPGAER LKELVQTLLS DEFRTKQCS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 9.0e-77 | 105 | 365 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 35 | 448 | 420 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001077453.1 | 0 | 91 | 449 | 1 | 358 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_171851.1 | 0 | 1 | 449 | 1 | 447 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_192243.1 | 0 | 1 | 449 | 1 | 448 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002319376.1 | 0 | 18 | 449 | 1 | 433 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517977.1 | 0 | 11 | 449 | 1 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000000001 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000000001 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000000001 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000000001 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000000004 | 121 | 325 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
