| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 352664 |
| Family | GT77 |
| Protein Properties | Length: 305 Molecular Weight: 34569.5 Isoelectric Point: 9.412 |
| Chromosome | Chromosome/Scaffold: 6 Start: 24111321 End: 24113212 |
| Description | rhamnogalacturonan xylosyltransferase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT77 | 126 | 296 | 1.3004e-42 |
| EKVLVIAEDYATLYKVNEKWPGHAVLIPPALDSKTAYSFGSQGFFNFTARRPQHLLQVLELGYNVMYNDVDMVWLQDPFQYLEGSHDVYFTDDLPQIKPL NHSHDLPHPGRNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 305 Download |
| MAQKQQIFHQ QRPFSSSPRS YSSISVRPIS VRSRNGLLLL LLALFFLLGV FLPWPGSPLF 60 QFPNRLSSSS SSLSPSRQSK WHDYTLAQAA KFVAKNGTVI VCAVSSPFLP FLNNWLISVS 120 RQKHQEKVLV IAEDYATLYK VNEKWPGHAV LIPPALDSKT AYSFGSQGFF NFTARRPQHL 180 LQVLELGYNV MYNDVDMVWL QDPFQYLEGS HDVYFTDDLP QIKPLNHSHD LPHPGRNGET 240 YICSCMIYLR PTNGAKLLMK KWSEELQSQA WSESIRFKAN DQPAFNLALN KTAHQSSLTD 300 ELFG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 5.0e-41 | 123 | 297 | 177 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT67590.1 | 0 | 80 | 298 | 76 | 294 | hypothetical protein At4G01770 [Arabidopsis thaliana] |
| GenBank | AAX32892.1 | 0 | 1 | 298 | 1 | 300 | putative xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_192084.1 | 0 | 1 | 298 | 1 | 300 | RGXT2 (rhamnogalacturonan xylosyltransferase 2); UDP-xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_192086.1 | 0 | 80 | 298 | 76 | 294 | RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_567211.1 | 0 | 71 | 295 | 69 | 290 | unknown protein [Arabidopsis thaliana] |
