CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID352729
FamilyGH18
Protein PropertiesLength: 870 Molecular Weight: 95321.1 Isoelectric Point: 7.6641
ChromosomeChromosome/Scaffold: 6 Start: 24525750 End: 24530528
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181084161.3e-29
  YDIAKIFNSKFTHLSPVWYDLKSSSQGSGLVLEGRHNADKGWIQELRSRGNALILPRVVLEAIPGEMLKKKKLREKAINLIVTECKEMEYDGIVLESWSR
  WAAYGVLHDPDMRKMALQFVKQLGDALHSTSSLRNNQQHMQFMYVVGPPRSEKLQMYDFGPEDLQFLKDSVDGFSLMTYDFSNPQNPGPNAPVKWIDLTL
  KLLLGSCNSIDSNIARKVLLGINFYGNDFVISGDSGGGGAITGRDYLALLQKHKPTFRWDKESGEHLFMYRDDKNIKHAVFYPTLMSILLRLENARLWGI
  GISIWEIGQ
Full Sequence
Protein Sequence     Length: 870     Download
MARRRHSSAT ESLKRRKDGG ESLSQVVEPD SDRRLITIFV IFFILIPAVS IVVYKVKFAD    60
RVIKTELSIR HKGIVKTDIN FQEIITEHSK AAENQQLGTM IIQNSKGYDI AKIFNSKFTH    120
LSPVWYDLKS SSQGSGLVLE GRHNADKGWI QELRSRGNAL ILPRVVLEAI PGEMLKKKKL    180
REKAINLIVT ECKEMEYDGI VLESWSRWAA YGVLHDPDMR KMALQFVKQL GDALHSTSSL    240
RNNQQHMQFM YVVGPPRSEK LQMYDFGPED LQFLKDSVDG FSLMTYDFSN PQNPGPNAPV    300
KWIDLTLKLL LGSCNSIDSN IARKVLLGIN FYGNDFVISG DSGGGGAITG RDYLALLQKH    360
KPTFRWDKES GEHLFMYRDD KNIKHAVFYP TLMSILLRLE NARLWGIGIS IWEIGQVKCL    420
VSVLCVLDKG HFGKYAEASL EESSILCGHT FDMQFGTNPM SVLSEKRSEP RKPFSLPNLF    480
PPKSPRPISQ ESFLKRFNGG LALLTSVLSS ATAPAKSLTY EEALQQSMTT SSSFDSDGLI    540
EGISNFVTDN PLVISGGVAA LAVPFVLSQV LNKKPKSWGV ESAKNAYTKL GTDDNAQLLD    600
IRATADFRQV GSPNIKGLGK KAVSIVYNGE DKPGFLKKLS LKFKDPENTT LFILDNSLIQ    660
SDLFEWKARF DGNSELVAEL VALNGFKSAY AIKDGAEGPR GWLNSGLPWV EPKKTLSLDL    720
SSLTDSISGV FGESSDGVSV ALGVAAAAGL SVFAFTEDRK QTLKQVDEFL NTKVAPKELV    780
DELKEIGKAL LPQSTSNKAL PAPATVAAEA ATATTTTVDK PVPEPEAGAA TTTTVDKPVP    840
EPEPVVEAAA AVAQYPDLKP PSSPMPSQP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_181.0e-9107416340+
COG3858COG38585.0e-16175416248+
cd02874GH18_CFLE_spore_hydrolase4.0e-21174416253+
smart00636Glyco_188.0e-30108416345+
cd02876GH18_SI-CLP3.0e-135104416318+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2dcq_A05837159128A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB1vee_A05837159128A Chain A, Nmr Structure Of The Hypothetical Rhodanese Domain At4g01050 From Arabidopsis Thaliana
PDB3bxw_A04841630384B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B04841630384B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.000005220414127308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Transmembrane Domains
StartEnd
3554
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny