| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 356484 |
| Family | GH14 |
| Protein Properties | Length: 683 Molecular Weight: 76319.6 Isoelectric Point: 5.7808 |
| Chromosome | Chromosome/Scaffold: 8 Start: 2069741 End: 2072812 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 254 | 654 | 0 |
| YAMLPVGIIDSFGQLVDPEGVRQELSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNIIRDFKLKLQVVMAFHEYGGNASGNVMISLPQWVLEV GKDNPDIFFTDREGRRSFECLNWSIDKERVLHGRTGIEVYFDFMRSFRSEFDDLFVEGLIAAVEIGLGASGELKYPSFPERMGWIYPGIGEFQCYDKYSQ LNLQKEAKSRGFAFWGKGPENAGQYNSQPHETGFFQERGEYDSYYGRFFLNWYSQLLIGHAENVLSLANLAFEETKIIVKIPAIYWSYKTASHAAELTAG YYNPSNRDGYSLVFETLKKYSVTAKFVCPGPQMSPNAHEEALADPEGLSWQVINAAWDKGLLIGGENMITCFDREGCMRLIDIAKPRNHPDSYHFSFFTY R | |||
| Full Sequence |
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| Protein Sequence Length: 683 Download |
| MHTLNTTTGS QDPNFDPIPD PDQFPNRNRN LQQSRRPRGF AAAAAAASIA PTENDVNNGN 60 IAGIGGGEGS SSGGGGGGGK GKREREKEKE RTKLRERHRR AITSRMLAGL RQYGNFPLPA 120 RADMNDVIAA LAREAGWSVD ADGTTYRQSH QPNNVVQFPT RSIESPLSSS TLKNCAKAAL 180 ECQQHSVLRI DENLSPVSLD SVVIAESDHP GNGRYTGASP ITSVGCLEAN QLIQDVHAAE 240 PRNDFTEGFY VPVYAMLPVG IIDSFGQLVD PEGVRQELSY MKSLNVDGVV IDCWWGIVEG 300 WNPQKYVWSG YRELFNIIRD FKLKLQVVMA FHEYGGNASG NVMISLPQWV LEVGKDNPDI 360 FFTDREGRRS FECLNWSIDK ERVLHGRTGI EVYFDFMRSF RSEFDDLFVE GLIAAVEIGL 420 GASGELKYPS FPERMGWIYP GIGEFQCYDK YSQLNLQKEA KSRGFAFWGK GPENAGQYNS 480 QPHETGFFQE RGEYDSYYGR FFLNWYSQLL IGHAENVLSL ANLAFEETKI IVKIPAIYWS 540 YKTASHAAEL TAGYYNPSNR DGYSLVFETL KKYSVTAKFV CPGPQMSPNA HEEALADPEG 600 LSWQVINAAW DKGLLIGGEN MITCFDREGC MRLIDIAKPR NHPDSYHFSF FTYRQPSPLV 660 QGSTCFPDLD YFIKRMHGDI QR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 8.0e-103 | 247 | 626 | 388 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 6.0e-117 | 251 | 626 | 381 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-143 | 250 | 679 | 436 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 1 | 682 | 686 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 92 | 679 | 610 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 250 | 679 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byd_A | 0 | 250 | 679 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byc_A | 0 | 250 | 679 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byb_A | 0 | 250 | 679 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1bya_A | 0 | 250 | 679 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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