CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID39707.m000015
FamilyGT41
Protein PropertiesLength: 268 Molecular Weight: 29482.6 Isoelectric Point: 6.4341
ChromosomeChromosome/Scaffold: 39707 Start: 49 End: 855
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT4112640
  VSYLGYPGTLGAPFVDYIIADRTVIPDHHREFYSEKVVALPDTYQANDDKRAIADRIFTRGDVGLAPAGFVFCCFNNNYKITPDMFDRWMRILDRVEGSM
  LWLLEASAESAANLRKEAIARGVAAERLVFAQRASLPDHLARHCLADLFLDSTPYNAHTTASDALWAGLPVLTVLGETFASRVAASLLHAVGLPELIAES
  PEAYEQMAVDLATHPSRLAALKTRLAANRLTAPLFDTKRFTGHIEAAYTAMHERHRAGLAPDHI
Full Sequence
Protein Sequence     Length: 268     Download
VSYLGYPGTL GAPFVDYIIA DRTVIPDHHR EFYSEKVVAL PDTYQANDDK RAIADRIFTR    60
GDVGLAPAGF VFCCFNNNYK ITPDMFDRWM RILDRVEGSM LWLLEASAES AANLRKEAIA    120
RGVAAERLVF AQRASLPDHL ARHCLADLFL DSTPYNAHTT ASDALWAGLP VLTVLGETFA    180
SRVAASLLHA VGLPELIAES PEAYEQMAVD LATHPSRLAA LKTRLAANRL TAPLFDTKRF    240
TGHIEAAYTA MHERHRAGLA PDHIVVPA 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13844Glyco_transf_416.0e-914444+
pfam13844Glyco_transf_413.0e-4959251193+
COG3914Spy3.0e-831257259+
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2vsn_B01255310563A Chain A, Structure And Topological Arrangement Of An O-Glcnac Transferase Homolog: Insight Into Molecular Control Of Intracellular Glycosylation
PDB2vsn_A01255310563A Chain A, Structure And Topological Arrangement Of An O-Glcnac Transferase Homolog: Insight Into Molecular Control Of Intracellular Glycosylation
PDB2xgs_B01255310563A Chain A, Structure And Topological Arrangement Of An O-Glcnac Transferase Homolog: Insight Into Molecular Control Of Intracellular Glycosylation
PDB2xgs_A01255310563A Chain A, Structure And Topological Arrangement Of An O-Glcnac Transferase Homolog: Insight Into Molecular Control Of Intracellular Glycosylation
PDB2xgo_B01255310563A Chain A, Structure And Topological Arrangement Of An O-Glcnac Transferase Homolog: Insight Into Molecular Control Of Intracellular Glycosylation
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_058_00216.4.334.533Aquca_058_00216.4.334.533Aquca_058_00216.3.560.759Aquca_058_00216.3.560.759Aquca_058_00216.1.773.973
Aquca_058_00216.1.773.973
Arabidopsis lyrata896453.754.961896453.754.961
Arabidopsis thalianaAT3G04240.1.754.961AT3G04240.1.754.961
Brachypodium distachyonBradi3g43577.3.780.979Bradi3g43577.3.780.979Bradi5g06647.1.792.998Bradi5g06647.1.792.998Bradi2g58616.1.761.965
Bradi2g58616.1.761.965
Brassica rapaBra040144.752.961Bra040144.752.961
Carica papayaevm.model.supercontig_51.46.533.743evm.model.supercontig_51.46.533.743
Capsella rubellaCarubv10012900m.754.955Carubv10012900m.754.955
Citrus clementinaCiclev10018711m.753.949Ciclev10018711m.753.949
Citrus sinensisorange1.1g003557m.591.791orange1.1g003557m.591.791orange1.1g002431m.702.902orange1.1g002431m.702.902orange1.1g002729m.702.886
orange1.1g002729m.702.886
Cucumis sativusCucsa.027630.1.766.964Cucsa.027630.1.766.964
Eucalyptus grandisEucgr.L00641.1.730.929Eucgr.L00641.1.730.929
Fragaria vescamrna16720.1-v1.0-hybrid.753.952mrna16720.1-v1.0-hybrid.753.952
Glycine maxGlyma10g31190.1.767.969Glyma10g31190.1.767.969Glyma20g36330.1.767.969Glyma20g36330.1.767.969
Gossypium raimondiiGorai.007G271100.1Gorai.013G189100.3.575.778Gorai.013G189100.3.575.778Gorai.013G189100.1.770.972Gorai.013G189100.1.770.972
Gorai.011G150500.5.705.913Gorai.011G150500.5.705.913Gorai.011G150500.4.705.913Gorai.011G150500.4.705.913Gorai.011G150500.2.778.986
Gorai.011G150500.2.778.986Gorai.011G150500.1.784.992Gorai.011G150500.1.784.992Gorai.007G271100.2Gorai.013G189100.2.770.954
Gorai.013G189100.2.770.954
Linum usitatissimumLus10003576.755.956Lus10003576.755.956Lus10004779.756.956Lus10004779.756.956Lus10003113.756.956
Lus10003113.756.956
Malus domesticaMDP0000233292.759.959MDP0000233292.759.959
Manihot esculentacassava4.1_001015m.753.953cassava4.1_001015m.753.953cassava4.1_002695m.485.686cassava4.1_002695m.485.686cassava4.1_002691m.485.686
cassava4.1_002691m.485.686cassava4.1_001021m.752.953cassava4.1_001021m.752.953
Medicago truncatulaMedtr1g079510.2.521.726Medtr1g079510.2.521.726Medtr1g079510.1.763.967Medtr1g079510.1.763.967
Mimulus guttatusmgv1a000777m.768.972mgv1a000777m.768.972mgv1a000982m.703.906mgv1a000982m.703.906
Oryza sativaLOC_Os02g28830.1.426.628LOC_Os02g28830.1.426.628LOC_Os01g68680.1.758.959LOC_Os01g68680.1.758.959
Panicum virgatumPavirv00063187m.788.989Pavirv00063187m.788.989Pavirv00016961m
Physcomitrella patensPp1s177_132V6.1.776.975Pp1s177_132V6.1.776.975Pp1s263_4V6.1.778.976Pp1s263_4V6.1.778.976
Phaseolus vulgarisPhvul.007G119800.1.768.970Phvul.007G119800.1.768.970
Picea abiesMA_247226g0010.480.681MA_247226g0010.480.681MA_76964g0020.545.746MA_76964g0020.545.746
Populus trichocarpaPotri.013G051400.7.383.584Potri.013G051400.7.383.584Potri.013G051400.6.524.724Potri.013G051400.6.524.724Potri.013G051400.2.763.963
Potri.013G051400.2.763.963Potri.019G025600.6.390.588Potri.019G025600.6.390.588Potri.019G025600.5.526.724Potri.019G025600.5.526.724
Potri.019G025600.4.594.792Potri.019G025600.4.594.792Potri.019G025600.3.655.853Potri.019G025600.3.655.853Potri.019G025600.2.761.959
Potri.019G025600.2.761.959Potri.019G025600.1.761.959Potri.019G025600.1.761.959Potri.013G051400.1.763.964Potri.013G051400.1.763.964
Potri.013G051400.3.763.961Potri.013G051400.3.763.961Potri.013G051400.4.763.947Potri.013G051400.4.763.947
Prunus persicappa000862m.759.959ppa000862m.759.959
Ricinus communis29680.m001749.759.96029680.m001749.759.96032488.m000020
Setaria italicaSi016197m.790.991Si016197m.790.991Si000265m.652.855Si000265m.652.855
Selaginella moellendorffii143846.655.856143846.655.856
Sorghum bicolorSb04g019560.1.790.998Sb04g019560.1.790.998
Thellungiella halophilaThhalv10019996m.754.959Thhalv10019996m.754.959Thhalv10020000m.729.933Thhalv10020000m.729.933
Vitis viniferaGSVIVT01026359001.766.967GSVIVT01026359001.766.967
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny