| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 405438 |
| Family | GT19 |
| Protein Properties | Length: 401 Molecular Weight: 43962.3 Isoelectric Point: 8.6236 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 37 | 396 | 0 |
| VFVVAGEPSGDVIGGRLLAAMRELWPASLRLSGIGGSCMEREGVKSIFEMDDLAVMGVPELLPHLITLSRRLHQAVDAAVRFDPHIIVTIDSKGFSFRFL RKIKDFCAKSKVPGPFCVHYVCPSFWAWKGGEEKLRNLSEVVDHLLCILPFEEGICKSSGLNASFVGHPVLDDAFDLAGKSADFNVIQSKWMIHGNGQKF RQDHNLTSESPVITVLPGSRAQELHKMLPIYGSALKHLSRSFPGLAAIIPTVPNRTLTGIIDMAVRDWGLPVVVVPGASLEDKYNSFAASDAALVTSGTA VMQLQMCRVPCVVAYRANILTEWIIKQRTVLKYVSLPNILLDSPAVPEALFSSCKPDRLA | |||
| Full Sequence |
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| Protein Sequence Length: 401 Download |
| MAPWLLRSCP ARRVWRRWLS GDAVSPGRRT IDDPVRVFVV AGEPSGDVIG GRLLAAMREL 60 WPASLRLSGI GGSCMEREGV KSIFEMDDLA VMGVPELLPH LITLSRRLHQ AVDAAVRFDP 120 HIIVTIDSKG FSFRFLRKIK DFCAKSKVPG PFCVHYVCPS FWAWKGGEEK LRNLSEVVDH 180 LLCILPFEEG ICKSSGLNAS FVGHPVLDDA FDLAGKSADF NVIQSKWMIH GNGQKFRQDH 240 NLTSESPVIT VLPGSRAQEL HKMLPIYGSA LKHLSRSFPG LAAIIPTVPN RTLTGIIDMA 300 VRDWGLPVVV VPGASLEDKY NSFAASDAAL VTSGTAVMQL QMCRVPCVVA YRANILTEWI 360 IKQRTVLKYV SLPNILLDSP AVPEALFSSC KPDRLACLLG * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 9.0e-38 | 38 | 384 | 352 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 9.0e-53 | 37 | 396 | 362 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 5.0e-72 | 37 | 396 | 360 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 2.0e-91 | 34 | 396 | 363 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 4.0e-95 | 34 | 396 | 364 | + lipid-A-disaccharide synthase; Reviewed | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC71491.1 | 0 | 32 | 400 | 41 | 404 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_001044267.1 | 0 | 32 | 400 | 41 | 404 | Os01g0752600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_001761865.1 | 0 | 33 | 390 | 48 | 402 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761948.1 | 0 | 32 | 399 | 6 | 370 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002528957.1 | 0 | 32 | 399 | 43 | 407 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG864023 | 279 | 119 | 396 | 0 |
| DT652350 | 262 | 7 | 267 | 0 |
| EE622357 | 261 | 84 | 344 | 0 |
| DV519136 | 273 | 7 | 278 | 0 |
| DR962527 | 259 | 7 | 264 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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