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Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 405960 |
Family | AA3 |
Protein Properties | Length: 517 Molecular Weight: 55211.9 Isoelectric Point: 8.7134 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 22 | 513 | 0 |
NDDGAVSFIREANSTTLEHKYDYIVVGGGTAGCAIAATLSQRCKVLVLERGGSPYGNPLLLRIENSGNTFANPGGLEAPNQAFTSEDGVASIRPNVLGGG SSINGAVYNRAPDEFISDAKLDKNLVESSYAWVEKVVASRPRNFSAFQNSIRGALLEVGVTPDFGFTYKYVVGTKTTGNTFDSHGQRHPSSDLLLAYANH KNIDVLLHATVYKVLLQGGRSRGVLYTDNLGRSHTALLSSERSEVIISAGALGSPQLLMLSGVGPKTHLEEMGIPVILDLPKVGKGMGDNPTNTIILRSR IPVGSLIQQVVGVSKLNFSAGGYILSQDSGAIAGEVNGPLSTGELFLKSINASETPRVRFNYFQNPVDLQRCIAGVNTLEEMVLSRSMAALVFGNQSLPS GGTVSSPDRRNATLVASGSVNRTISEFCRQSVSTNYHYHGGCPLGEVVDWSFRVMGLNGLRVVDGSTFLSTPGTNPQATVMMLGRYVGVEIL |
Full Sequence |
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Protein Sequence Length: 517 Download |
MLKFHLFFIA VIYCTLRIIK ANDDGAVSFI REANSTTLEH KYDYIVVGGG TAGCAIAATL 60 SQRCKVLVLE RGGSPYGNPL LLRIENSGNT FANPGGLEAP NQAFTSEDGV ASIRPNVLGG 120 GSSINGAVYN RAPDEFISDA KLDKNLVESS YAWVEKVVAS RPRNFSAFQN SIRGALLEVG 180 VTPDFGFTYK YVVGTKTTGN TFDSHGQRHP SSDLLLAYAN HKNIDVLLHA TVYKVLLQGG 240 RSRGVLYTDN LGRSHTALLS SERSEVIISA GALGSPQLLM LSGVGPKTHL EEMGIPVILD 300 LPKVGKGMGD NPTNTIILRS RIPVGSLIQQ VVGVSKLNFS AGGYILSQDS GAIAGEVNGP 360 LSTGELFLKS INASETPRVR FNYFQNPVDL QRCIAGVNTL EEMVLSRSMA ALVFGNQSLP 420 SGGTVSSPDR RNATLVASGS VNRTISEFCR QSVSTNYHYH GGCPLGEVVD WSFRVMGLNG 480 LRVVDGSTFL STPGTNPQAT VMMLGRYVGV EILKTR* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 0.001 | 39 | 131 | 108 | + choline dehydrogenase; Validated | ||
TIGR01810 | betA | 2.0e-36 | 63 | 505 | 528 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
PRK02106 | PRK02106 | 2.0e-38 | 222 | 505 | 332 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 3.0e-39 | 35 | 514 | 568 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 3.0e-141 | 2 | 516 | 590 | + Protein HOTHEAD |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 16 | 516 | 1 | 517 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3gdp_A | 0 | 16 | 516 | 1 | 517 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3gdn_B | 0 | 16 | 516 | 1 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 16 | 516 | 1 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 16 | 516 | 1 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |