| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 40979.m000013 |
| Family | GH3 |
| Protein Properties | Length: 256 Molecular Weight: 27521 Isoelectric Point: 5.744 |
| Chromosome | Chromosome/Scaffold: 40979 Start: 84 End: 853 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 16 | 255 | 0 |
| AIPRLNIPAYNWWTESLHGALGPLPTTNFPEPIGLAASFDAPLVRQVAAAISTEVRALHTLGRETGRLGRIGTGLDTWSPNINIFRDPRWGRGQETYGED PHLTAALGVAFIHGIQGGNPELPDVIATPKHFAVHSGPESTRHVADVFVSAHDLEDTYLPAFRAAIVDAQAGSIMCAYNRINGQPACGSELLMKQHLRGA WGFKGYVVSDCDAVTDISEQHKYATDPAAAVAVALRTGTD | |||
| Full Sequence |
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| Protein Sequence Length: 256 Download |
| MTLDEKIDQL LNVAPAIPRL NIPAYNWWTE SLHGALGPLP TTNFPEPIGL AASFDAPLVR 60 QVAAAISTEV RALHTLGRET GRLGRIGTGL DTWSPNINIF RDPRWGRGQE TYGEDPHLTA 120 ALGVAFIHGI QGGNPELPDV IATPKHFAVH SGPESTRHVA DVFVSAHDLE DTYLPAFRAA 180 IVDAQAGSIM CAYNRINGQP ACGSELLMKQ HLRGAWGFKG YVVSDCDAVT DISEQHKYAT 240 DPAAAVAVAL RTGTDN 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK05337 | PRK05337 | 5.0e-8 | 112 | 225 | 125 | + beta-hexosaminidase; Provisional | ||
| PRK15098 | PRK15098 | 3.0e-44 | 1 | 255 | 298 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 1.0e-55 | 11 | 255 | 250 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-69 | 2 | 255 | 283 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PLN03080 | PLN03080 | 8.0e-76 | 1 | 255 | 278 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002536590.1 | 0 | 1 | 176 | 61 | 236 | beta-glucosidase [Ricinus communis] |
| RefSeq | XP_002539944.1 | 0 | 1 | 256 | 1 | 256 | beta-glucosidase, putative [Ricinus communis] |
| RefSeq | YP_001684029.1 | 0 | 1 | 256 | 53 | 308 | Beta-glucosidase [Caulobacter sp. K31] |
| RefSeq | ZP_01301591.1 | 0 | 1 | 256 | 42 | 297 | family 3 glycoside hydrolase [Sphingomonas sp. SKA58] |
| RefSeq | ZP_06120684.1 | 0 | 1 | 238 | 50 | 287 | glycoside hydrolase family 3 domain protein [Caulobacter segnis ATCC 21756] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 2e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
| PDB | 3u48_A | 2e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
| PDB | 3u4a_B | 7e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
| PDB | 3u4a_A | 7e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
| PDB | 4i3g_B | 5e-30 | 1 | 236 | 61 | 291 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GW451113 | 196 | 1 | 196 | 0 |
| DW486060 | 277 | 1 | 255 | 0 |
| DY273227 | 272 | 1 | 253 | 0 |
| CF212861 | 274 | 1 | 255 | 0 |
| GR156793 | 260 | 17 | 255 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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