Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 40979.m000013 |
Family | GH3 |
Protein Properties | Length: 256 Molecular Weight: 27521 Isoelectric Point: 5.744 |
Chromosome | Chromosome/Scaffold: 40979 Start: 84 End: 853 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 16 | 255 | 0 |
AIPRLNIPAYNWWTESLHGALGPLPTTNFPEPIGLAASFDAPLVRQVAAAISTEVRALHTLGRETGRLGRIGTGLDTWSPNINIFRDPRWGRGQETYGED PHLTAALGVAFIHGIQGGNPELPDVIATPKHFAVHSGPESTRHVADVFVSAHDLEDTYLPAFRAAIVDAQAGSIMCAYNRINGQPACGSELLMKQHLRGA WGFKGYVVSDCDAVTDISEQHKYATDPAAAVAVALRTGTD |
Full Sequence |
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Protein Sequence Length: 256 Download |
MTLDEKIDQL LNVAPAIPRL NIPAYNWWTE SLHGALGPLP TTNFPEPIGL AASFDAPLVR 60 QVAAAISTEV RALHTLGRET GRLGRIGTGL DTWSPNINIF RDPRWGRGQE TYGEDPHLTA 120 ALGVAFIHGI QGGNPELPDV IATPKHFAVH SGPESTRHVA DVFVSAHDLE DTYLPAFRAA 180 IVDAQAGSIM CAYNRINGQP ACGSELLMKQ HLRGAWGFKG YVVSDCDAVT DISEQHKYAT 240 DPAAAVAVAL RTGTDN |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK05337 | PRK05337 | 5.0e-8 | 112 | 225 | 125 | + beta-hexosaminidase; Provisional | ||
PRK15098 | PRK15098 | 3.0e-44 | 1 | 255 | 298 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-55 | 11 | 255 | 250 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-69 | 2 | 255 | 283 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 8.0e-76 | 1 | 255 | 278 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002536590.1 | 0 | 1 | 176 | 61 | 236 | beta-glucosidase [Ricinus communis] |
RefSeq | XP_002539944.1 | 0 | 1 | 256 | 1 | 256 | beta-glucosidase, putative [Ricinus communis] |
RefSeq | YP_001684029.1 | 0 | 1 | 256 | 53 | 308 | Beta-glucosidase [Caulobacter sp. K31] |
RefSeq | ZP_01301591.1 | 0 | 1 | 256 | 42 | 297 | family 3 glycoside hydrolase [Sphingomonas sp. SKA58] |
RefSeq | ZP_06120684.1 | 0 | 1 | 238 | 50 | 287 | glycoside hydrolase family 3 domain protein [Caulobacter segnis ATCC 21756] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 2e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
PDB | 3u48_A | 2e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
PDB | 3u4a_B | 7e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
PDB | 3u4a_A | 7e-31 | 6 | 255 | 61 | 289 | A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose |
PDB | 4i3g_B | 5e-30 | 1 | 236 | 61 | 291 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW451113 | 196 | 1 | 196 | 0 |
DW486060 | 277 | 1 | 255 | 0 |
DY273227 | 272 | 1 | 253 | 0 |
CF212861 | 274 | 1 | 255 | 0 |
GR156793 | 260 | 17 | 255 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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