| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 410832 |
| Family | AA3 |
| Protein Properties | Length: 607 Molecular Weight: 65428 Isoelectric Point: 4.9771 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA3 | 32 | 470 | 0 |
| APDLIKDLDYIVVGGGAAGCALATTLSQNFTVLLLERGGSPYNNPLFMREENFMLGLLDEGTQGFVSTDGSWSRAQEIKQIGLDPVKANASYIWAENVIV SLPTLGPFQTAFHKGLVEAGVTPDLGATYEHSVGTKTGGTLFDENGQRRPSSNLIAAYANPQNLQVLLNAQAVKIHFDVSDSGAPRAMEVDFIDRNGGLH TAFLKQDSASEIILSASAIGTPHLLMLSGVGPADHLKQFNINVVLALPVGKNIADNPATRVYVPSPLPVESALVKVAGITPFGSYIESLSGVQNLQGSVI FQKVAGPKSTGEVLLSNDSLDITNNPVITFNYYNNSDDLATCIGGLNIMEKFLLSKTMTPFVSGMQAMPSGNVLGLPIRKFTSQEVINATLSAYCKVNVG TMWHYHGSCRVGQVVDSQYKVLGAERLRIVDGSVFDFCP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 607 Download |
| MELKCLALAA FLFIAYVAAD DFPFPLSEAH QAPDLIKDLD YIVVGGGAAG CALATTLSQN 60 FTVLLLERGG SPYNNPLFMR EENFMLGLLD EGTQGFVSTD GSWSRAQEIK QIGLDPVKAN 120 ASYIWAENVI VSLPTLGPFQ TAFHKGLVEA GVTPDLGATY EHSVGTKTGG TLFDENGQRR 180 PSSNLIAAYA NPQNLQVLLN AQAVKIHFDV SDSGAPRAME VDFIDRNGGL HTAFLKQDSA 240 SEIILSASAI GTPHLLMLSG VGPADHLKQF NINVVLALPV GKNIADNPAT RVYVPSPLPV 300 ESALVKVAGI TPFGSYIESL SGVQNLQGSV IFQKVAGPKS TGEVLLSNDS LDITNNPVIT 360 FNYYNNSDDL ATCIGGLNIM EKFLLSKTMT PFVSGMQAMP SGNVLGLPIR KFTSQEVINA 420 TLSAYCKVNV GTMWHYHGSC RVGQVVDSQY KVLGAERLRI VDGSVFDFCP VFTIFLFANG 480 QEPARVLGTD CATRGKQILS CIDTTDPKVW LPGPCPRRIL HLLTYTGFAL RNSERCDGNA 540 LVNVLAQDGQ LVLVWSAGIP FETMCLIFIS PYSVTGILGI WHDLFDLMPQ REEVTWNALV 600 SRLSDI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01810 | betA | 3.0e-16 | 134 | 466 | 392 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| pfam05199 | GMC_oxred_C | 2.0e-16 | 338 | 466 | 134 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| TIGR03970 | Rv0697 | 8.0e-20 | 134 | 466 | 359 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 2.0e-20 | 138 | 466 | 387 | + choline dehydrogenase; Validated | ||
| PLN02785 | PLN02785 | 2.0e-111 | 40 | 470 | 510 | + Protein HOTHEAD | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31862.1 | 0 | 19 | 470 | 29 | 514 | unnamed protein product [Vitis vinifera] |
| GenBank | EEE57571.1 | 0 | 26 | 470 | 31 | 537 | hypothetical protein OsJ_07923 [Oryza sativa Japonica Group] |
| RefSeq | XP_002282510.1 | 0 | 26 | 470 | 1 | 514 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298074.1 | 0 | 8 | 470 | 14 | 546 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002454481.1 | 0 | 3 | 470 | 11 | 556 | hypothetical protein SORBIDRAFT_04g031910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3red_L | 0 | 14 | 470 | 1 | 495 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_K | 0 | 14 | 470 | 1 | 495 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_J | 0 | 14 | 470 | 1 | 495 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_I | 0 | 14 | 470 | 1 | 495 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_H | 0 | 14 | 470 | 1 | 495 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
