| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 412910 |
| Family | PL1 |
| Protein Properties | Length: 339 Molecular Weight: 37017.8 Isoelectric Point: 7.6378 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 81 | 256 | 0 |
| VFNVSGTISLASPLRVTSHKTIDGRGQRIKITGNGLLLQSCEHVIVNNLEFERGRGDAITIVADAKDVWIDRCTLSDYNDGLIDITRRSTRVTVSRCHFY RHKKTMLISANPRHVGDRNIKVTIHHCYFDQTQERHPRVRFAKVHLYNNYFREWGVYGVRASVEAQIVSEHNVYEA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 339 Download |
| MRVCFVALVL LFQIASGGGA PPPPYHGVDA TLRGLAGAAE GFGAASIGGL EGDTYSVTNL 60 LDDGPGSLRY AAARDEPLWV VFNVSGTISL ASPLRVTSHK TIDGRGQRIK ITGNGLLLQS 120 CEHVIVNNLE FERGRGDAIT IVADAKDVWI DRCTLSDYND GLIDITRRST RVTVSRCHFY 180 RHKKTMLISA NPRHVGDRNI KVTIHHCYFD QTQERHPRVR FAKVHLYNNY FREWGVYGVR 240 ASVEAQIVSE HNVYEAGTSK RAFDYFIEKA PDSDIAVAGS ISSDGDVFLN GAEGPANSTA 300 FLPEDYYSVN PKVQPAGKQL VRVIRETAGW QNIPLPGS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00544 | Pec_lyase_C | 9.0e-33 | 80 | 254 | 198 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| COG3866 | PelB | 3.0e-40 | 77 | 311 | 260 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| smart00656 | Amb_all | 9.0e-53 | 83 | 257 | 190 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96132.1 | 0 | 24 | 336 | 62 | 381 | unknown [Populus trichocarpa] |
| GenBank | ABR16354.1 | 0 | 25 | 336 | 64 | 379 | unknown [Picea sitchensis] |
| RefSeq | XP_002309435.1 | 0 | 24 | 336 | 6 | 325 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002311134.1 | 0 | 24 | 336 | 5 | 324 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323433.1 | 0 | 24 | 336 | 6 | 325 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 9.80909e-45 | 29 | 292 | 15 | 307 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 9.80909e-45 | 29 | 292 | 15 | 307 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3vmw_A | 7e-25 | 75 | 314 | 45 | 311 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3vmv_A | 7e-25 | 75 | 314 | 45 | 311 | A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 |
| PDB | 3zsc_A | 9e-22 | 81 | 254 | 49 | 246 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
