| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 413925 |
| Family | AA3 |
| Protein Properties | Length: 314 Molecular Weight: 33312.2 Isoelectric Point: 5.2745 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 34 | 295 | 1.2e-30 |
| PQLYDYIVVGGGTAGCPLAATLSQKFRVLLLERGGSPLIKAGVTPDNGASYDFQVGTQTGGTIFDDQGTRRPASNLLVYANPRNLDILLHAQVELILFRG EVSNTYLWQDDLGIFSWQEIEVMESSTPGSPQLLLLSGVGPANQLTAMGIKVVYNLPGVGKQVSDNPAALVNIVSPSPVESALAQVVGITAPFGNFIEAA CGVAVTGVPGARAGNIIEKVAGPLSSGTLVLQSKHVRDNPLVTFNYFQHPRDLQACIAGVNT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 314 Download |
| MAFLALILAP CLLSACKTQN LPPMHEATDS KFHPQLYDYI VVGGGTAGCP LAATLSQKFR 60 VLLLERGGSP LIKAGVTPDN GASYDFQVGT QTGGTIFDDQ GTRRPASNLL VYANPRNLDI 120 LLHAQVELIL FRGEVSNTYL WQDDLGIFSW QEIEVMESST PGSPQLLLLS GVGPANQLTA 180 MGIKVVYNLP GVGKQVSDNP AALVNIVSPS PVESALAQVV GITAPFGNFI EAACGVAVTG 240 VPGARAGNII EKVAGPLSSG TLVLQSKHVR DNPLVTFNYF QHPRDLQACI AGVNTIEERT 300 LDDHMALPRW LLS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01810 | betA | 0.006 | 38 | 69 | 34 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| PRK02106 | PRK02106 | 1.0e-12 | 66 | 198 | 156 | + choline dehydrogenase; Validated | ||
| TIGR01810 | betA | 5.0e-13 | 64 | 287 | 273 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| PLN02785 | PLN02785 | 5.0e-19 | 3 | 77 | 89 | + Protein HOTHEAD | ||
| PLN02785 | PLN02785 | 1.0e-55 | 71 | 297 | 281 | + Protein HOTHEAD | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31862.1 | 0.0000003 | 16 | 70 | 24 | 80 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI31862.1 | 0 | 71 | 296 | 179 | 422 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002267807.1 | 0 | 71 | 296 | 179 | 444 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002267848.1 | 0.0000003 | 16 | 70 | 24 | 80 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002267848.1 | 0 | 71 | 296 | 179 | 444 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3red_L | 7e-40 | 71 | 298 | 162 | 409 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_L | 0.00000000005 | 25 | 153 | 16 | 157 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_K | 7e-40 | 71 | 298 | 162 | 409 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_K | 0.00000000005 | 25 | 153 | 16 | 157 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_J | 7e-40 | 71 | 298 | 162 | 409 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| amygdalin and prunasin degradation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
| vicianin bioactivation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
