| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 415432 |
| Family | GH29 |
| Protein Properties | Length: 337 Molecular Weight: 37501.4 Isoelectric Point: 4.3508 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 1 | 106 | 3.4e-38 |
| MDAAQSAGAQLVILTVKHHDGFCLWPSAYTNFSVASSSWRGGKGDVVAEFVAAARERGLDVGFYLSPWDLHESCYGDTLLYNEFYRELLTGYGPISEVWL DDASPD | |||
| Full Sequence |
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| Protein Sequence Length: 337 Download |
| MDAAQSAGAQ LVILTVKHHD GFCLWPSAYT NFSVASSSWR GGKGDVVAEF VAAARERGLD 60 VGFYLSPWDL HESCYGDTLL YNEFYRELLT GYGPISEVWL DDASPDIRWV GNEYGEAGQP 120 CWAMVNRSSI MISRSNGQNE APKSLEQLLD VFYKSSARNC LLLLNVPPNS LGLINESDFQ 180 TLERFSSTID SIFSVNLAAN PLSVTASSAC SSLFGPKQIL DERMETFWAP MQGESTGWIE 240 LDLGKVSKFN ALEIREPVNM GQRVMEYLVE AWDSVGWYLV SNGSTIGYRK VDQLEEYQVC 300 AACLIRLLID ALRGDSLICF FGLYFDMYNL RHLSSI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00754 | F5_F8_type_C | 0.0001 | 203 | 283 | 85 | + F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. | ||
| pfam01120 | Alpha_L_fucos | 7.0e-14 | 1 | 176 | 232 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 2.0e-16 | 1 | 185 | 249 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 8.0e-29 | 1 | 324 | 394 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH68057.1 | 0 | 3 | 332 | 91 | 484 | B0103C08-B0602B01.14 [Oryza sativa (indica cultivar-group)] |
| RefSeq | NP_001053546.1 | 0 | 12 | 332 | 100 | 484 | Os04g0560400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_001762481.1 | 0 | 4 | 335 | 56 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002313533.1 | 0 | 1 | 329 | 63 | 457 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523703.1 | 0 | 1 | 330 | 112 | 508 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 1 | 324 | 60 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 1 | 324 | 60 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ues_B | 0 | 1 | 304 | 68 | 459 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 1 | 304 | 68 | 459 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3mo4_B | 0 | 1 | 304 | 70 | 461 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FE512538 | 260 | 108 | 337 | 0 |
| FE456877 | 201 | 138 | 337 | 0 |
| DN837980 | 221 | 118 | 337 | 0 |
| FE511486 | 201 | 138 | 337 | 0 |
| FE484260 | 183 | 138 | 319 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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