| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 420481 |
| Family | CBM22 |
| Protein Properties | Length: 587 Molecular Weight: 65009.5 Isoelectric Point: 6.5092 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM22 | 76 | 197 | 8.7e-25 |
| VLKNPAFDADLLGWSPFGGCTLKIQVQGRNKFLVATNRNAGFHGPSQALANLTQGSKYTLSAWLQVNGGSDDTAPLVKATIKANGQYISAGSVAARNKCW TFLKGGFIPEFNASSATLYFES | |||
| GH10 | 257 | 518 | 0 |
| ITGDFPFGSAIASTILDNPTYQKWFVTRFNTAVFENEMKWYSTERQQGKVSYETADKMLDFCKANNILVRGHNVLWNDPQYQPGWVKDLSASELRTATMS RIESVMSHYAGKLPQWDVLNEMLHFNFFESKLGSNAAVEIYKFAQEIDPETTLFLNDFNVIEMKAAGIKKLGIGLEGHFSGKPNLVYMRAVLDKLATLEL PIWLTEVDIMNSVDSENQAIYLQQVLREAFSHPAVKGIVLWTALHPYGCYRMCLTDQNFKNL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 587 Download |
| MPSSSLVLPI LFQLSAFCPL ETDFNASFSR AVERGHPHHR KPDPSPPAPP EHGSYDQTAF 60 SECLAAPTSP LYNGGVLKNP AFDADLLGWS PFGGCTLKIQ VQGRNKFLVA TNRNAGFHGP 120 SQALANLTQG SKYTLSAWLQ VNGGSDDTAP LVKATIKANG QYISAGSVAA RNKCWTFLKG 180 GFIPEFNASS ATLYFESSDP KVDIWLDSVS LQPFSDEEWS KHQDISIKKS RTRSVTLSVT 240 DCKGHGIHNA DIQVEQITGD FPFGSAIAST ILDNPTYQKW FVTRFNTAVF ENEMKWYSTE 300 RQQGKVSYET ADKMLDFCKA NNILVRGHNV LWNDPQYQPG WVKDLSASEL RTATMSRIES 360 VMSHYAGKLP QWDVLNEMLH FNFFESKLGS NAAVEIYKFA QEIDPETTLF LNDFNVIEMK 420 AAGIKKLGIG LEGHFSGKPN LVYMRAVLDK LATLELPIWL TEVDIMNSVD SENQAIYLQQ 480 VLREAFSHPA VKGIVLWTAL HPYGCYRMCL TDQNFKNLPA GNIVDVFLKN IRTVGLSGTT 540 DHEGSFSFQG FHGEYEISVT HNRTSVIKRL AIGPDTDSQT IHVLVS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 5.0e-8 | 74 | 200 | 135 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 4.0e-39 | 260 | 497 | 271 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 9.0e-59 | 255 | 497 | 272 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-78 | 294 | 522 | 263 | + Glycosyl hydrolase family 10. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI37893.1 | 0 | 55 | 565 | 104 | 606 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC74705.1 | 0 | 54 | 583 | 33 | 579 | hypothetical protein OsI_10421 [Oryza sativa Indica Group] |
| RefSeq | NP_195577.2 | 0 | 55 | 583 | 34 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277675.1 | 0 | 43 | 565 | 16 | 530 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002465685.1 | 0 | 55 | 583 | 38 | 584 | hypothetical protein SORBIDRAFT_01g043720 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-31 | 263 | 503 | 15 | 274 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0n_A | 4e-31 | 263 | 497 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0m_A | 4e-31 | 263 | 497 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0l_A | 4e-31 | 263 | 497 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v0k_A | 4e-31 | 263 | 497 | 16 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
