Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 439243 |
Family | PL1 |
Protein Properties | Length: 426 Molecular Weight: 46256.3 Isoelectric Point: 9.3006 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 157 | 355 | 0 |
ITFSRDMNIRLKAELLITSYKTIDARGANVQIGLNGPCLTLQYVDHVIIHGLTLRDCKPSSSGRVISSVDHTGFRGGSDGDAIAIFGSSNVWIDHCSLSR AQDGLIDAIHGSTAITISNNYFSDHDKVMLLGHSDSYSADRNMKITVVYNHFVGCVQRMPRGRFGYFHVVNNNYENWDMYAIGGSANPTFFSEANRFLA |
Full Sequence |
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Protein Sequence Length: 426 Download |
MPGSLGGFLV WCLLLSLRLG WPLENEPTDA LATSSEKEIV IPVPLDGTGR KLLASEKKEK 60 KKKKKKKKKK SSYNYYKPKY VSFASSFTGN TIDDCWVGGD WRGDRMHLAD CAVGFGAGAA 120 GGRGGKVYQV TDPGDDPVQP WPGTLRYGVT RSGPLWITFS RDMNIRLKAE LLITSYKTID 180 ARGANVQIGL NGPCLTLQYV DHVIIHGLTL RDCKPSSSGR VISSVDHTGF RGGSDGDAIA 240 IFGSSNVWID HCSLSRAQDG LIDAIHGSTA ITISNNYFSD HDKVMLLGHS DSYSADRNMK 300 ITVVYNHFVG CVQRMPRGRF GYFHVVNNNY ENWDMYAIGG SANPTFFSEA NRFLATGAKQ 360 VTKREAKGGS NWLWQSSGDL FVNGAYFVES GGGDASPHYS GGQYFATRSA SMVTRLTANA 420 GPLGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-28 | 168 | 353 | 198 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 7.0e-67 | 168 | 353 | 208 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 9.0e-79 | 162 | 357 | 207 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002263615.1 | 0 | 72 | 424 | 33 | 390 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317128.1 | 0 | 73 | 423 | 28 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331545.1 | 0 | 76 | 423 | 28 | 384 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518441.1 | 0 | 70 | 423 | 7 | 369 | Pectate lyase precursor, putative [Ricinus communis] |
RefSeq | XP_002518442.1 | 0 | 76 | 423 | 28 | 382 | Pectate lyase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 90 | 421 | 2 | 343 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 90 | 421 | 2 | 343 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 1e-18 | 108 | 358 | 2 | 251 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1vbl_A | 6e-18 | 190 | 353 | 145 | 330 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1bn8_A | 2e-17 | 237 | 331 | 205 | 317 | A Chain A, Bacillus Subtilis Pectate Lyase |