| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 46351.m000019 |
| Family | GH54 |
| Protein Properties | Length: 140 Molecular Weight: 14790.9 Isoelectric Point: 7.9433 |
| Chromosome | Chromosome/Scaffold: 46351 Start: 14 End: 433 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH54 | 31 | 140 | 0 |
| PCDIYAKAGAPCVAAHSTTRALYAAYNGPLYQVKRQSDGKTRDIGVVEDAGYANAAAQDAFCAGTYCWITILYDQSGKRNHLVQAPRGTWTGPALGGMDN LPLADLAPVT | |||
| Full Sequence |
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| Protein Sequence Length: 140 Download |
| MHILKLFVSL ALLLSGLPAW ASAQAVRPEG PCDIYAKAGA PCVAAHSTTR ALYAAYNGPL 60 YQVKRQSDGK TRDIGVVEDA GYANAAAQDA FCAGTYCWIT ILYDQSGKRN HLVQAPRGTW 120 TGPALGGMDN LPLADLAPVT |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09206 | ArabFuran-catal | 9.0e-47 | 31 | 140 | 110 | + Alpha-L-arabinofuranosidase B, catalytic. Members of this family, which are present in fungal alpha-L-arabinofuranosidase B, adopt a beta-sandwich fold similar to that of Concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyzes the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0031221 | arabinan metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d44_A | 2e-35 | 30 | 140 | 2 | 112 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 2d43_A | 2e-35 | 30 | 140 | 2 | 112 | A Chain A, Crystal Structure Of Arabinofuranosidase Complexed With Arabinotriose |
| PDB | 1wd4_A | 2e-35 | 30 | 140 | 2 | 112 | A Chain A, Crystal Structure Of Arabinofuranosidase Complexed With Arabinotriose |
| PDB | 1wd3_A | 2e-35 | 30 | 140 | 2 | 112 | A Chain A, Crystal Structure Of Arabinofuranosidase |
| Signal Peptide |
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| Cleavage Site |
| 23 |
| Hydropathy |
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