Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 470571 |
Family | GT1 |
Protein Properties | Length: 1165 Molecular Weight: 131776 Isoelectric Point: 6.9169 |
Chromosome | Chromosome/Scaffold: 1 Start: 2030807 End: 2038123 |
Description | Pentatricopeptide repeat (PPR-like) superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 243 | 420 | 3e-38 |
PEDKNYGFSLFGAKVAECMEWLNLKQPSSVVYVSFGSLVVLKEDQLIELAAGLKQSGHFFLWVVRGGEKNKLPENYIEEIGEKGLIVSWSPQLEVLTHKS IGCFLTHCGWNSTLEGLSLGVPMIGMPHWADQPTNAKFMEDVWKVGVRVKANGDGFVRRGEIVRRVGEVMEGEKVPKR |
Full Sequence |
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Protein Sequence Length: 1165 Download |
MKEGSHVIVL PFPAQGHITP MSQFCKRLAS KGLKLTLVLV SDNPSPPYKT EHDSIAVVPI 60 SNGFEEGEER SQDLDDYMER VEASIKNSLP KLIEDMKLSG NPPRALVYDS TMPWLLDVAH 120 TYGLSGAVFF TQPWIVSAIY YHVFKGSFSV PSTKYGHSTL ASLPSFPMLN ANDLPSFLCE 180 SSSYPYILRT VIDQLSNIDR VDIVLCNTFD KLEEKLLKWV QSVWPVLNIG PTVPSMYLDK 240 RLPEDKNYGF SLFGAKVAEC MEWLNLKQPS SVVYVSFGSL VVLKEDQLIE LAAGLKQSGH 300 FFLWVVRGGE KNKLPENYIE EIGEKGLIVS WSPQLEVLTH KSIGCFLTHC GWNSTLEGLS 360 LGVPMIGMPH WADQPTNAKF MEDVWKVGVR VKANGDGFVR RGEIVRRVGE VMEGEKVPKR 420 IVSFVKMTVR KYDVVSTKIP KSIVVFNRTP CPSFSDFSTL TDTRPFPDYS PKKASVRDTE 480 FVHQITNVIK LRRAEPLRRS LKPYECKFKT DHLIWVLMKI KCDYRLVLDF FDWARSRRDS 540 NLESLCIVIH LAVASKDLKV AQSLISSFWE RPKLNVTESF VQFFDLLVYT YKDWGSDPRV 600 FDVFFQVLVE FGMLPEARKV FEKMLNYGLV LSVDSCNVYL ARLSKDCNKT ATAIIVFREF 660 PEVGVCWNVA SYNIVIHFVC QLGRINEAHH LLLLMELKGY TPDVISYSTV INGYCRFGEL 720 DKVWKLIEKM KQKGLKPNSY TYGSIIGLLC RICKLAEAEE AFSEMIGQGI LPDTIVYTTL 780 VDGFCKRGDI RAASKFFYEM HSRDITPDVL TYTAIISGFC QIGDMVEAGK LFHEMLCRGL 840 EPDIITFTEL MNGYCKAGHI KDAFRVHNHM IQAGCSPNVV TYTTLIDGLC KEGDLDSANE 900 LLHEMWKIGL QPNIFTYNSI VNGLCKSGNI EEAVKLVGEF EAAGLNADTV TYTTLMDAYC 960 KSGEMDKAQE ILTEMLGKGL QPTIVTFNVL MNGFCLHGML EDGEKLLNWM LAKGIAPNAT 1020 TFNCLVKQYC IRNNLKAATA IYKDMCSRGV EPDGKTYENL VKGHCNARNM KEAWFLFQEM 1080 KGKGFSVSVS TYSVLIKGFF KRKKFVEARE IFDQMRRDGL AADKEIFDFF SDTKYKGKRP 1140 DTIVDPIDEI IENYLVDEQL REAN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02210 | PLN02210 | 8.0e-59 | 5 | 392 | 402 | + UDP-glucosyl transferase | ||
PLN02152 | PLN02152 | 5.0e-65 | 6 | 396 | 421 | + indole-3-acetate beta-glucosyltransferase | ||
PLN02448 | PLN02448 | 7.0e-66 | 4 | 392 | 404 | + UDP-glycosyltransferase family protein | ||
PLN02555 | PLN02555 | 9.0e-93 | 6 | 391 | 405 | + limonoid glucosyltransferase | ||
PLN02173 | PLN02173 | 6.0e-116 | 6 | 393 | 400 | + UDP-glucosyl transferase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_172058.1 | 0 | 1 | 1164 | 1 | 1184 | UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] |
Swiss-Prot | P0C7P7 | 0 | 1 | 416 | 1 | 416 | Y1567_ARATH RecName: Full=Uncharacterized UDP-glucosyltransferase At1g05670 |
Swiss-Prot | Q0WVK7 | 0 | 457 | 1164 | 34 | 741 | PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g05665, mitochondrial; Flags: Precursor |
RefSeq | XP_002268680.1 | 0 | 425 | 1156 | 8 | 736 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268680.1 | 0 | 601 | 1098 | 252 | 748 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2pq6_A | 0 | 6 | 416 | 10 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2vg8_A | 1.96182e-44 | 6 | 416 | 8 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2vch_A | 1.96182e-44 | 6 | 416 | 8 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2vce_A | 1.96182e-44 | 6 | 416 | 8 | 431 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3hbj_A | 3e-39 | 6 | 416 | 15 | 416 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG490267 | 298 | 1 | 298 | 0 |
EG490268 | 278 | 100 | 377 | 0 |
BX836671 | 195 | 948 | 1142 | 0 |
BX836671 | 151 | 789 | 939 | 0 |
BX836671 | 328 | 697 | 988 | 3e-36 |
Sequence Alignments (This image is cropped. Click for full image.) |
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