Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 471293 |
Family | CE8 |
Protein Properties | Length: 557 Molecular Weight: 61420.1 Isoelectric Point: 9.2979 |
Chromosome | Chromosome/Scaffold: 1 Start: 4627407 End: 4629529 |
Description | methylesterase PCR A |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 245 | 541 | 0 |
NVVVAKDGTGKFKTVNEAVAAAPENSNSRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDVTVITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTA GPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKLT ASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVKWKGFKVIKDSKEAEQFTVAKLIQG |
Full Sequence |
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Protein Sequence Length: 557 Download |
MSNSNQPLLS KPKSFKHKNL CLVLSFVAIL GSAAIYTSQL ISINTSNDDS LLTPSQICHG 60 AHNQDSCQAL LSEFTTLSLS KVNRLDLLHV FLKNSVWRLE STMTMVSEAR IRSNGVRDKA 120 GLADCEEMMD VSKDRMVSSM EELRGGNYNL ESYSNVHTWL SSVLTNYMTC LESISDVSVN 180 SKPRVKPQLE DLVSRARVAL AIFVSVLPAR DDLKMIISNS FPSWLTALDR KLLESAPKTL 240 KVTANVVVAK DGTGKFKTVN EAVAAAPENS NSRYVIYVKK GVYKETIDIG KKKKNLMLVG 300 DGKDVTVITG SLNVIDGSTT FRSATVAANG DGFMAQDIWF QNTAGPAKHQ AVALRVSADQ 360 TVINRCRIDA YQDTLYTHTL RQFYRDSYIT GTVDFIFGNS AVVFQNCDIV ARNPGAGQKN 420 MLTAQGREDQ NQNTAISIQK CKLTASSDLA PVKGSVKTFL GRPWKLYSRT VIMQSFIDNH 480 IDPAGWFPWD GEFALSTLYY GEYANTGPGA DTSKRVKWKG FKVIKDSKEA EQFTVAKLIQ 540 GGLWLKPTGV TFQEWL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 5.0e-164 | 92 | 552 | 474 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 1.0e-169 | 2 | 552 | 573 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 1 | 556 | 557 | + pectinesterase/pectinesterase inhibitor | ||
PLN02488 | PLN02488 | 0 | 57 | 556 | 510 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 245 | 541 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD29733.1 | 0 | 50 | 556 | 47 | 554 | pectin methylesterase [Sesbania rostrata] |
RefSeq | NP_172624.1 | 0 | 1 | 556 | 1 | 557 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 1 | 556 | 1 | 557 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
RefSeq | XP_002317208.1 | 0 | 1 | 556 | 1 | 549 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518523.1 | 0 | 57 | 556 | 55 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 242 | 556 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 242 | 552 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-24 | 242 | 544 | 2 | 337 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-24 | 242 | 544 | 2 | 337 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-24 | 242 | 544 | 2 | 337 | A Chain A, Pectin Methylesterase From Carrot |