| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 471542 |
| Family | CBM43 |
| Protein Properties | Length: 200 Molecular Weight: 20476.1 Isoelectric Point: 6.1938 |
| Chromosome | Chromosome/Scaffold: 1 Start: 5815544 End: 5816717 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 22 | 99 | 8.1e-28 |
| CLCKDGIGDTELQTSIDYACGTLADCNPIHDNGSCFQPNTIKSHCDWAVNSYFQNAAQVPGSCNFSGTAITNPNPPSN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 200 Download |
| MKVLLGLLLL LALTKSSSAI YCLCKDGIGD TELQTSIDYA CGTLADCNPI HDNGSCFQPN 60 TIKSHCDWAV NSYFQNAAQV PGSCNFSGTA ITNPNPPSNL ANGCIYPSSA SSTRSPPSTT 120 PPTGSGTPPT NGTTPFPGTP FPGTPFPGTP PVFGPTGVFN PSNPGSGASS LVISSVYTLC 180 FSLLVFLCGS DVRFGFSHV* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-16 | 21 | 91 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-26 | 21 | 106 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 7e-16 | 14 | 96 | 6 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
