| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 472870 |
| Family | CE11 |
| Protein Properties | Length: 1046 Molecular Weight: 118514 Isoelectric Point: 7.7591 |
| Chromosome | Chromosome/Scaffold: 1 Start: 11729015 End: 11739779 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE11 | 314 | 585 | 0 |
| QQTLAGSVEVKGKSLHSGKFSTVKLIPEIAGAGRYFEFRSRFIPASIEFAQESPLCTTLLKDELKIRTVEHLLSALEAKGVDNCRIQIASESSYDREVEV PIFDGSAKEWVDAIEGVGLKVAQNHVGESVEKMVSHVNKHVYVCKNDSFVAAYPAVETRITCGIDFPQVPAIGCQWFSWRPIHESSFAKDIAPSRTFCVY EEVERMREAGLIKGGSLDNAIVCSTEHGWMNPPLRFENEACRHKILDLIGDLSLVARGGNGGLPVAHIIAFK | |||
| Full Sequence |
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| Protein Sequence Length: 1046 Download |
| EDNTRLVVWN PCTGQTRWIQ RENCYDLYDN YSLGSYQDKR CNDNSYNILA HTGFGYDHKF 60 QIYEINSNSW RIIDATFDFK LEYIGEGVGE KEKRLGIFLI SFDYTTERFE RLRLPNKEEK 120 LSMLSQRAIK SKPEIWVTNK IGETQVVSWT MVLAVYLQPG LCIWDGVSFW VDEKKKVVVC 180 CDNLKDQGKT TKHIFGEDNK FDSNLPRYHR QKKKRRMIIV FVNVRYQHIR CQSCPVKRIV 240 LQQKQEDQIK SIVFNKREEI KNHQRLRSAY IATKKMTLSV TVKATKPSSL VTWIRYSSAA 300 SSPTISLNTS GRLQQTLAGS VEVKGKSLHS GKFSTVKLIP EIAGAGRYFE FRSRFIPASI 360 EFAQESPLCT TLLKDELKIR TVEHLLSALE AKGVDNCRIQ IASESSYDRE VEVPIFDGSA 420 KEWVDAIEGV GLKVAQNHVG ESVEKMVSHV NKHVYVCKND SFVAAYPAVE TRITCGIDFP 480 QVPAIGCQWF SWRPIHESSF AKDIAPSRTF CVYEEVERMR EAGLIKGGSL DNAIVCSTEH 540 GWMNPPLRFE NEACRHKILD LIGDLSLVAR GGNGGLPVAH IIAFKRIDEL IRCIKELNSM 600 LSCNKNSPTQ QSMTCEAEVY IGLALLLSKV GKMTRDGKNK VGRRMKGTSM CDLPPKFVGE 660 KILTKIPITS LRANEYVRSS TEAGRGEDPH QDSHNISESG EIHLQIMEDF NQRLGFGFHL 720 CRNKDKEDLI DLSIKQVDLL NQVEISKVYH CDGLLLCVAK DNSRVVVWNP YLGQTRWIRP 780 RTESNIGDSY ALGYDINQTF PFPGTKSTTC ALIHGGFSRS LPPGKWTLII ASNTYFFAHE 840 DSHSVETDED GEITDLEDFL LCFDFTTETF GLRLPLPFHS TIDATVTLSN VRDQQLAVLY 900 HNEGLHSDDR FTTVEFWVTT SIEPNSVSWS KFLIVDMRPI ALAGVLFDNY MGATFFIDEE 960 EKVAAVFDLD GYLRTESARY HTAFISGKDG FFKPVTLGVA PNVGKPCPRT GHIPTTYRPP 1020 LVCSSSYLPS LVQVNQPRKR KERDV* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 1.0e-59 | 314 | 585 | 305 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 2.0e-62 | 314 | 585 | 278 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam03331 | LpxC | 2.0e-73 | 314 | 585 | 278 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 1.0e-76 | 312 | 585 | 282 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 8.0e-92 | 314 | 585 | 277 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 3e-30 | 314 | 569 | 7 | 253 | A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 |
| PDB | 4fw7_C | 3e-30 | 314 | 569 | 7 | 253 | A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 |
| PDB | 4fw7_B | 3e-30 | 314 | 569 | 7 | 253 | A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 |
| PDB | 4fw7_A | 3e-30 | 314 | 569 | 7 | 253 | A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 |
| PDB | 4fw6_D | 3e-30 | 314 | 569 | 7 | 253 | A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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