| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 472957 |
| Family | GH47 |
| Protein Properties | Length: 575 Molecular Weight: 65711.9 Isoelectric Point: 6.7244 |
| Chromosome | Chromosome/Scaffold: 1 Start: 12036895 End: 12040570 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH47 | 44 | 477 | 0 |
| MFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLKLEHLPTDYNGSAVTLVESLSSLAILGNSTEFEKGILWLSENLTFDIDARVNLFECNIRVLGGL ISAHLLAIDPTNRLIQGSYNNQLLRLAEDLGKRFLPAFETPTGLPYAWINLKNGVMENETTETSTSGCGSLILEMGSLSRLTGDPRFESAALRALRQLWR MRSSLDLLGTTLDVVTGEWIEYSSSIGAGVDSFYEYLLKAYILFGKEDYWRMFRSAYMASQKYFRHGPWYHEANMWSGKPTYWQLTSLQAFWPGLQVLVG DIAAANSSHREFFHVWEKFGVLPERYLLDHQIIHPTMKYYPLRPELAESTFYLYQATKDPWYLDVGETIVKSLNLYTKVPGGFASVRDVTTMQLEDHQHS FFLAETCKYLYLLFDDSFVAKRNYIFTTEGHPIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 575 Download |
| MSCPLHPKRL FLCLLISLAF FVVDPSSQHL EVKKKQMREK VREMFYHAYD NYMTYAFPHD 60 ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS SLAILGNSTE FEKGILWLSE 120 NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPTNRLIQG SYNNQLLRLA EDLGKRFLPA 180 FETPTGLPYA WINLKNGVME NETTETSTSG CGSLILEMGS LSRLTGDPRF ESAALRALRQ 240 LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFRSAY 300 MASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE 360 KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT KDPWYLDVGE TIVKSLNLYT 420 KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS 480 SWHEKLPENY FSGNWTLSKS GSWESRASAL SLQVCPSIAL NSRRPKQHRE SACHVPDEQI 540 NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 1.0e-78 | 38 | 478 | 479 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 8.0e-148 | 44 | 476 | 470 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 35 | 479 | 18 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo3_A | 0 | 29 | 478 | 6 | 456 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo2_A | 0 | 29 | 478 | 6 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 29 | 478 | 6 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 4ayr_A | 0 | 35 | 460 | 11 | 416 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
